Affinity Density: a novel genomic approach to the identification of transcription factor regulatory targets

por Hazelett, Dennis J., Lakeland, Daniel L., Weiss, Joseph B.
Publicado 2009

motifbreakR: an R/Bioconductor package for predicting variant effects at transcription factor binding sites

por Coetzee, Simon G., Coetzee, Gerhard A., Hazelett, Dennis J.
Publicado 2015

A molecular taxonomy of tumors independent of tissue-of-origin

por Nguyen, Peter T., Coetzee, Simon G., Lakeland, Daniel L., Hazelett, Dennis J.
Publicado 2021

Comparison of Parallel High-Throughput RNA Sequencing Between Knockout of TDP-43 and Its Overexpression Reveals Primarily Nonreciprocal and Nonoverlapping Gene Expression Changes i...

por Hazelett, Dennis J., Chang, Jer-Cherng, Lakeland, Daniel L., Morton, David B.
Publicado 2012

Enrichment of risk SNPs in regulatory regions implicate diverse tissues in Parkinson’s disease etiology

por Coetzee, Simon G., Pierce, Steven, Brundin, Patrik, Brundin, Lena, Hazelett, Dennis J., Coetzee, Gerhard A.
Publicado 2016

Nucleosome positioning and histone modifications define relationships between regulatory elements and nearby gene expression in breast epithelial cells

por Rhie, Suhn Kyong, Hazelett, Dennis J, Coetzee, Simon G, Yan, Chunli, Noushmehr, Houtan, Coetzee, Gerhard A
Publicado 2014

CRISPR-mediated deletion of prostate cancer risk-associated CTCF loop anchors identifies repressive chromatin loops

por Guo, Yu, Perez, Andrew A., Hazelett, Dennis J., Coetzee, Gerhard A., Rhie, Suhn Kyong, Farnham, Peggy J.
Publicado 2018

ELMER v.2: an R/Bioconductor package to reconstruct gene regulatory networks from DNA methylation and transcriptome profiles

por Silva, Tiago C, Coetzee, Simon G, Gull, Nicole, Yao, Lijing, Hazelett, Dennis J, Noushmehr, Houtan, Lin, De-Chen, Berman, Benjamin P
Publicado 2019

The PAX8 cistrome in epithelial ovarian cancer

por Adler, Emily K., Corona, Rosario I., Lee, Janet M., Rodriguez-Malave, Norma, Mhawech-Fauceglia, Paulette, Sowter, Heidi, Hazelett, Dennis J., Lawrenson, Kate, Gayther, Simon A.
Publicado 2017

GENAVi: a shiny web application for gene expression normalization, analysis and visualization

por Reyes, Alberto Luiz P., Silva, Tiago C., Coetzee, Simon G., Plummer, Jasmine T., Davis, Brian D., Chen, Stephanie, Hazelett, Dennis J., Lawrenson, Kate, Berman, Benjamin P., Gayther, Simon A., Jones, Michelle R.
Publicado 2019

Comprehensive Functional Annotation of 77 Prostate Cancer Risk Loci

por Hazelett, Dennis J., Rhie, Suhn Kyong, Gaddis, Malaina, Yan, Chunli, Lakeland, Daniel L., Coetzee, Simon G., Henderson, Brian E., Noushmehr, Houtan, Cozen, Wendy, Kote-Jarai, Zsofia, Eeles, Rosalind A., Easton, Douglas F., Haiman, Christopher A., Lu, Wange, Farnham, Peggy J., Coetzee, Gerhard A.
Publicado 2014

Non-coding somatic mutations converge on the PAX8 pathway in ovarian cancer

por Corona, Rosario I., Seo, Ji-Heui, Lin, Xianzhi, Hazelett, Dennis J., Reddy, Jessica, Fonseca, Marcos A. S., Abassi, Forough, Lin, Yvonne G., Mhawech-Fauceglia, Paulette Y., Shah, Sohrab P., Huntsman, David G., Gusev, Alexander, Karlan, Beth Y., Berman, Benjamin P., Freedman, Matthew L., Gayther, Simon A., Lawrenson, Kate
Publicado 2020

Two Novel Susceptibility Loci for Prostate Cancer in Men of African Ancestry

por Conti, David V., Wang, Kan, Sheng, Xin, Bensen, Jeannette T., Hazelett, Dennis J., Cook, Michael B., Ingles, Sue A., Kittles, Rick A., Strom, Sara S., Rybicki, Benjamin A., Nemesure, Barbara, Isaacs, William B., Stanford, Janet L., Zheng, Wei, Sanderson, Maureen, John, Esther M., Park, Jong Y., Xu, Jianfeng, Stevens, Victoria L., Berndt, Sonja I., Haiman, Christopher A.
Publicado 2017

Multiple novel prostate cancer susceptibility signals identified by fine-mapping of known risk loci among Europeans

por Amin Al Olama, Ali, Dadaev, Tokhir, Hazelett, Dennis J., Li, Qiuyan, Leongamornlert, Daniel, Saunders, Edward J., Stephens, Sarah, Cieza-Borrella, Clara, Whitmore, Ian, Benlloch Garcia, Sara, Giles, Graham G., Southey, Melissa C., Fitzgerald, Liesel, Gronberg, Henrik, Wiklund, Fredrik, Aly, Markus, Henderson, Brian E., Schumacher, Fredrick, Haiman, Christopher A., Schleutker, Johanna, Wahlfors, Tiina, Tammela, Teuvo L., Nordestgaard, Børge G., Key, Tim J., Travis, Ruth C., Neal, David E., Donovan, Jenny L., Hamdy, Freddie C., Pharoah, Paul, Pashayan, Nora, Khaw, Kay-Tee, Stanford, Janet L., Thibodeau, Stephen N., Mcdonnell, Shannon K., Schaid, Daniel J., Maier, Christiane, Vogel, Walther, Luedeke, Manuel, Herkommer, Kathleen, Kibel, Adam S., Cybulski, Cezary, Wokołorczyk, Dominika, Kluzniak, Wojciech, Cannon-Albright, Lisa, Brenner, Hermann, Butterbach, Katja, Arndt, Volker, Park, Jong Y., Sellers, Thomas, Lin, Hui-Yi, Slavov, Chavdar, Kaneva, Radka, Mitev, Vanio, Batra, Jyotsna, Clements, Judith A., Spurdle, Amanda, Teixeira, Manuel R., Paulo, Paula, Maia, Sofia, Pandha, Hardev, Michael, Agnieszka, Kierzek, Andrzej, Govindasami, Koveela, Guy, Michelle, Lophatonanon, Artitaya, Muir, Kenneth, Viñuela, Ana, Brown, Andrew A., Freedman, Mathew, Conti, David V., Easton, Douglas, Coetzee, Gerhard A., Eeles, Rosalind A., Kote-Jarai, Zsofia
Publicado 2015

A meta-analysis of 87,040 individuals identifies 23 new susceptibility loci for prostate cancer

por Al Olama, Ali Amin, Kote-Jarai, Zsofia, Berndt, Sonja I., Conti, David V., Schumacher, Fredrick, Han, Ying, Benlloch, Sara, Hazelett, Dennis J., Wang, Zhaoming, Saunders, Ed, Leongamornlert, Daniel, Lindstrom, Sara, Jugurnauth-Little, Sara, Dadaev, Tokhir, Tymrakiewicz, Malgorzata, Stram, Daniel O., Rand, Kristin, Wan, Peggy, Stram, Alex, Sheng, Xin, Pooler, Loreall C., Park, Karen, Xia, Lucy, Tyrer, Jonathan, Kolonel, Laurence N., Le Marchand, Loic, Hoover, Robert N., Machiela, Mitchell J., Yeager, Merideth, Burdette, Laurie, Chung, Charles C., Hutchinson, Amy, Yu, Kai, Goh, Chee, Ahmed, Mahbubl, Govindasami, Koveela, Guy, Michelle, Tammela, Teuvo L.J., Auvinen, Anssi, Wahlfors, Tiina, Schleutker, Johanna, Visakorpi, Tapio, Leinonen, Katri A., Xu, Jianfeng, Aly, Markus, Donovan, Jenny, Travis, Ruth C., Key, Tim J., Siddiq, Afshan, Canzian, Federico, Khaw, Kay-Tee, Takahashi, Atsushi, Kubo, Michiaki, Pharoah, Paul, Pashayan, Nora, Weischer, Maren, Nordestgaard, Borge G., Nielsen, Sune F., Klarskov, Peter, Røder, Martin Andreas, Iversen, Peter, Thibodeau, Stephen N., McDonnell, Shannon K, Schaid, Daniel J, Stanford, Janet L., Kolb, Suzanne, Holt, Sarah, Knudsen, Beatrice, Coll, Antonio Hurtado, Gapstur, Susan M., Diver, W. Ryan, Stevens, Victoria L., Maier, Christiane, Luedeke, Manuel, Herkommer, Kathleen, Rinckleb, Antje E., Strom, Sara S., Pettaway, Curtis, Yeboah, Edward D., Tettey, Yao, Biritwum, Richard B., Adjei, Andrew A., Tay, Evelyn, Truelove, Ann, Niwa, Shelley, Chokkalingam, Anand P., Cannon-Albright, Lisa, Cybulski, Cezary, Wokołorczyk, Dominika, Kluźniak, Wojciech, Park, Jong, Sellers, Thomas, Lin, Hui-Yi, Isaacs, William B., Partin, Alan W., Brenner, Hermann, Dieffenbach, Aida Karina, Stegmaier, Christa, Chen, Constance, Giovannucci, Edward L., Ma, Jing, Stampfer, Meir, Penney, Kathryn L., Mucci, Lorelei, John, Esther M., Ingles, Sue A., Kittles, Rick A., Murphy, Adam B., Pandha, Hardev, Michael, Agnieszka, Kierzek, Andrzej M., Blot, William, Signorello, Lisa B., Zheng, Wei, Albanes, Demetrius, Virtamo, Jarmo, Weinstein, Stephanie, Nemesure, Barbara, Carpten, John, Leske, Cristina, Wu, Suh-Yuh, Hennis, Anselm, Kibel, Adam S., Rybicki, Benjamin A., Neslund-Dudas, Christine, Hsing, Ann W., Chu, Lisa, Goodman, Phyllis J., Klein, Eric A, Zheng, S. Lilly, Batra, Jyotsna, Clements, Judith, Spurdle, Amanda, Teixeira, Manuel R., Paulo, Paula, Maia, Sofia, Slavov, Chavdar, Kaneva, Radka, Mitev, Vanio, Witte, John S., Casey, Graham, Gillanders, Elizabeth M., Seminara, Daniella, Riboli, Elio, Hamdy, Freddie C., Coetzee, Gerhard A., Li, Qiyuan, Freedman, Matthew L., Hunter, David J., Muir, Kenneth, Gronberg, Henrik, Neal, David E., Southey, Melissa, Giles, Graham G., Severi, Gianluca, Cook, Michael B., Nakagawa, Hidewaki, Wiklund, Fredrik, Kraft, Peter, Chanock, Stephen J., Henderson, Brian E., Easton, Douglas F., Eeles, Rosalind A., Haiman, Christopher A.
Publicado 2014