Genome-wide studies in prostate cancer poised liquid biopsy as a molecular discovery tool

por Lo, Nicholas, He, Housheng Hansen, Chen, Sujun
Publicado 2023

The Basis and Promise of Programmable RNA Editing and Modification

por Lo, Nicholas, Xu, Xin, Soares, Fraser, He, Housheng Hansen
Publicado 2022

Pioneer of prostate cancer: past, present and the future of FOXA1

por Teng, Mona, Zhou, Stanley, Cai, Changmeng, Lupien, Mathieu, He, Housheng Hansen
Publicado 2020

A closer look into DNase I hypersensitivity

por He, Housheng Hansen, Meyer, Clifford A, Long, Henry, Liu, X Shirley, Brown, Myles
Publicado 2013

Variant Set Enrichment: an R package to identify disease-associated functional genomic regions

por Ahmed, Musaddeque, Sallari, Richard C., Guo, Haiyang, Moore, Jason H., He, Housheng Hansen, Lupien, Mathieu
Publicado 2017

Differential DNase I hypersensitivity reveals factor-dependent chromatin dynamics

por He, Housheng Hansen, Meyer, Clifford A., Chen, Mei Wei, Jordan, V. Craig, Brown, Myles, Liu, X. Shirley
Publicado 2012

CYCLIN K down-regulation induces androgen receptor gene intronic polyadenylation, variant expression and PARP inhibitor vulnerability in castration-resistant prostate cancer

por Sun, Rui, Wei, Ting, Ding, Donglin, Zhang, Jianong, Chen, Sujun, He, Housheng Hansen, Wang, Liguo, Huang, Haojie
Publicado 2022

MEDIPIPE: an automated and comprehensive pipeline for cfMeDIP-seq data quality control and analysis

por Zeng, Yong, Ye, Wenbin, Stutheit-Zhao, Eric Y, Han, Ming, Bratman, Scott V, Pugh, Trevor J, He, Housheng Hansen
Publicado 2023

Gastrointestinal transcription factors drive lineage-specific developmental programs in organ specification and cancer

por Francis, Roshane, Guo, Haiyang, Streutker, Catherine, Ahmed, Musaddeque, Yung, Theodora, Dirks, Peter B., He, Housheng Hansen, Kim, Tae-Hee
Publicado 2019

TMPRSS2-ERG activates NO-cGMP signaling in prostate cancer cells

por Zhou, Feng, Gao, Shuai, Han, Dong, Han, Wanting, Chen, Sujun, Patalano, Susan, Macoska, Jill A., He, Housheng Hansen, Cai, Changmeng
Publicado 2019

ZNF545 loss promotes ribosome biogenesis and protein translation to initiate colorectal tumorigenesis in mice

por Wang, Shiyan, Wong, Chi Chun, Zhang, Yanquan, Huang, Junzhe, Li, Chuangen, Zhai, Jianning, Wang, Guoping, Wei, Hong, Zhang, Xueji, He, Housheng Hansen, Yu, Jun
Publicado 2021

Somatic driver mutation prevalence in 1844 prostate cancers identifies ZNRF3 loss as a predictor of metastatic relapse

por Fraser, Michael, Livingstone, Julie, Wrana, Jeffrey L., Finelli, Antonio, He, Housheng Hansen, van der Kwast, Theodorus, Zlotta, Alexandre R., Bristow, Robert G., Boutros, Paul C.
Publicado 2021

Refined RIP-seq protocol for epitranscriptome analysis with low input materials

por Zeng, Yong, Wang, Shiyan, Gao, Shanshan, Soares, Fraser, Ahmed, Musadeqque, Guo, Haiyang, Wang, Miranda, Hua, Junjie Tony, Guan, Jiansheng, Moran, Michael F., Tsao, Ming Sound, He, Housheng Hansen
Publicado 2018

Modeling cis-regulation with a compendium of genome-wide histone H3K27ac profiles

por Wang, Su, Zang, Chongzhi, Xiao, Tengfei, Fan, Jingyu, Mei, Shenglin, Qin, Qian, Wu, Qiu, Li, Xujuan, Xu, Kexin, He, Housheng Hansen, Brown, Myles, Meyer, Clifford A., Liu, X. Shirley
Publicado 2016

Uncovering the dosage-dependent roles of Arid1a in gastric tumorigenesis for combinatorial drug therapy

por Loe, Adrian Kwan Ho, Francis, Roshane, Seo, Jieun, Du, Lutao, Wang, Yunshan, Kim, Ji-Eun, Hakim, Shaheed W., Kim, Jung-Eun, He, Housheng Hansen, Guo, Haiyang, Kim, Tae-Hee
Publicado 2021

Analysis of optimized DNase-seq reveals intrinsic bias in transcription factor footprint identification

por He, Housheng Hansen, Meyer, Clifford A., Hu, Sheng'en Shawn, Chen, Mei-Wei, Zang, Chongzhi, Liu, Yin, Rao, Prakash K., Fei, Teng, Xu, Han, Long, Henry, Liu, X. Shirley, Brown, Myles
Publicado 2013

High-dimensional genomic data bias correction and data integration using MANCIE

por Zang, Chongzhi, Wang, Tao, Deng, Ke, Li, Bo, Hu, Sheng'en, Qin, Qian, Xiao, Tengfei, Zhang, Shihua, Meyer, Clifford A., He, Housheng Hansen, Brown, Myles, Liu, Jun S., Xie, Yang, Liu, X. Shirley
Publicado 2016

Nucleosome Dynamics Define Transcriptional Enhancers

por He, Housheng Hansen, Meyer, Clifford A, Shin, Hyunjin, Bailey, Shannon T, Wei, Gang, Wang, Qianben, Zhang, Yong, Xu, Kexin, Ni, Min, Lupien, Mathieu, Mieczkowski, Piotr, Lieb, Jason D, Zhao, Keji, Brown, Myles, Liu, Xiaole Shirley
Publicado 2010

Digital Quantification of Gene Expression in Sequential Breast Cancer Biopsies Reveals Activation of an Immune Response

por Jeselsohn, Rinath M., Werner, Lillian, Regan, Meredith M., Fatima, Aquila, Gilmore, Lauren, Collins, Laura C., Beck, Andrew H., Bailey, Shannon T., He, Housheng Hansen, Buchwalter, Gilles, Brown, Myles, Iglehart, J. Dirk, Richardson, Andrea, Come, Steven E.
Publicado 2013

Exploiting the tumor-suppressive activity of the androgen receptor by CDK4/6 inhibition in castration-resistant prostate cancer

por Han, Wanting, Liu, Mingyu, Han, Dong, Toure, Anthia A., Li, Muqing, Besschetnova, Anna, Wang, Zifeng, Patalano, Susan, Macoska, Jill A., Lam, Hung-Ming, Corey, Eva, He, Housheng Hansen, Gao, Shuai, Balk, Steven P., Cai, Changmeng
Publicado 2022