Visualization methods for statistical analysis of microarray clusters

por Hibbs, Matthew A, Dirksen, Nathaniel C, Li, Kai, Troyanskaya, Olga G
Publicado 2005

Finding function: evaluation methods for functional genomic data

por Myers, Chad L, Barrett, Daniel R, Hibbs, Matthew A, Huttenhower, Curtis, Troyanskaya, Olga G
Publicado 2006

GOLEM: an interactive graph-based gene-ontology navigation and analysis tool

por Sealfon, Rachel SG, Hibbs, Matthew A, Huttenhower, Curtis, Myers, Chad L, Troyanskaya, Olga G
Publicado 2006

Functional Genomics Complements Quantitative Genetics in Identifying Disease-Gene Associations

por Guan, Yuanfang, Ackert-Bicknell, Cheryl L., Kell, Braden, Troyanskaya, Olga G., Hibbs, Matthew A.
Publicado 2010

Cell-Type-Specific Predictive Network Yields Novel Insights into Mouse Embryonic Stem Cell Self-Renewal and Cell Fate

por Dowell, Karen G., Simons, Allen K., Wang, Zack Z., Yun, Kyuson, Hibbs, Matthew A.
Publicado 2013

Canonical A-to-I and C-to-U RNA Editing Is Enriched at 3′UTRs and microRNA Target Sites in Multiple Mouse Tissues

por Gu, Tongjun, Buaas, Frank W., Simons, Allen K., Ackert-Bicknell, Cheryl L., Braun, Robert E., Hibbs, Matthew A.
Publicado 2012

Regulatory complexity revealed by integrated cytological and RNA-seq analyses of meiotic substages in mouse spermatocytes

por Ball, Robyn L., Fujiwara, Yasuhiro, Sun, Fengyun, Hu, Jianjun, Hibbs, Matthew A., Handel, Mary Ann, Carter, Gregory W.
Publicado 2016

Directing Experimental Biology: A Case Study in Mitochondrial Biogenesis

por Hibbs, Matthew A., Myers, Chad L., Huttenhower, Curtis, Hess, David C., Li, Kai, Caudy, Amy A., Troyanskaya, Olga G.
Publicado 2009

Discovery of biological networks from diverse functional genomic data

por Myers, Chad L, Robson, Drew, Wible, Adam, Hibbs, Matthew A, Chiriac, Camelia, Theesfeld, Chandra L, Dolinski, Kara, Troyanskaya, Olga G
Publicado 2005

Tissue-Specific Functional Networks for Prioritizing Phenotype and Disease Genes

por Guan, Yuanfang, Gorenshteyn, Dmitriy, Burmeister, Margit, Wong, Aaron K., Schimenti, John C., Handel, Mary Ann, Bult, Carol J., Hibbs, Matthew A., Troyanskaya, Olga G.
Publicado 2012

Maternal diabetes and obesity influence the fetal epigenome in a largely Hispanic population

por Rizzo, Heather E., Escaname, Elia N., Alana, Nicholas B., Lavender, Elizabeth, Gelfond, Jonathan, Fernandez, Roman, Hibbs, Matthew A., King, Jonathan M., Carr, Nicholas R., Blanco, Cynthia L.
Publicado 2020

Nearest Neighbor Networks: clustering expression data based on gene neighborhoods

por Huttenhower, Curtis, Flamholz, Avi I, Landis, Jessica N, Sahi, Sauhard, Myers, Chad L, Olszewski, Kellen L, Hibbs, Matthew A, Siemers, Nathan O, Troyanskaya, Olga G, Coller, Hilary A
Publicado 2007

Affinity-seq detects genome-wide PRDM9 binding sites and reveals the impact of prior chromatin modifications on mammalian recombination hotspot usage

por Walker, Michael, Billings, Timothy, Baker, Christopher L., Powers, Natalie, Tian, Hui, Saxl, Ruth L., Choi, Kwangbom, Hibbs, Matthew A., Carter, Gregory W., Handel, Mary Ann, Paigen, Kenneth, Petkov, Petko M.
Publicado 2015

Computationally Driven, Quantitative Experiments Discover Genes Required for Mitochondrial Biogenesis

por Hess, David C., Myers, Chad L., Huttenhower, Curtis, Hibbs, Matthew A., Hayes, Alicia P., Paw, Jadine, Clore, John J., Mendoza, Rosa M., Luis, Bryan San, Nislow, Corey, Giaever, Guri, Costanzo, Michael, Troyanskaya, Olga G., Caudy, Amy A.
Publicado 2009

RNA-Seq Alignment to Individualized Genomes Improves Transcript Abundance Estimates in Multiparent Populations

por Munger, Steven C., Raghupathy, Narayanan, Choi, Kwangbom, Simons, Allen K., Gatti, Daniel M., Hinerfeld, Douglas A., Svenson, Karen L., Keller, Mark P., Attie, Alan D., Hibbs, Matthew A., Graber, Joel H., Chesler, Elissa J., Churchill, Gary A.
Publicado 2014

Phenotypic Dissection of Bone Mineral Density Reveals Skeletal Site Specificity and Facilitates the Identification of Novel Loci in the Genetic Regulation of Bone Mass Attainment

por Kemp, John P., Medina-Gomez, Carolina, Estrada, Karol, St Pourcain, Beate, Heppe, Denise H. M., Warrington, Nicole M., Oei, Ling, Ring, Susan M., Kruithof, Claudia J., Timpson, Nicholas J., Wolber, Lisa E., Reppe, Sjur, Gautvik, Kaare, Grundberg, Elin, Ge, Bing, van der Eerden, Bram, van de Peppel, Jeroen, Hibbs, Matthew A., Ackert-Bicknell, Cheryl L., Choi, Kwangbom, Koller, Daniel L., Econs, Michael J., Williams, Frances M. K., Foroud, Tatiana, Carola Zillikens, M., Ohlsson, Claes, Hofman, Albert, Uitterlinden, André G., Davey Smith, George, Jaddoe, Vincent W. V., Tobias, Jonathan H., Rivadeneira, Fernando, Evans, David M.
Publicado 2014