Development and evaluation of a culture-free microbiota profiling platform (MYcrobiota) for clinical diagnostics

por Boers, Stefan A., Hiltemann, Saskia D., Stubbs, Andrew P., Jansen, Ruud, Hays, John P.
Publicado 2018

WeFaceNano: a user-friendly pipeline for complete ONT sequence assembly and detection of antibiotic resistance in multi-plasmid bacterial isolates

por Heikema, Astrid P., Jansen, Rick, Hiltemann, Saskia D., Hays, John P., Stubbs, Andrew P.
Publicado 2021

Galaxy mothur Toolset (GmT): a user-friendly application for 16S rRNA gene sequencing analysis using mothur

por Hiltemann, Saskia D, Boers, Stefan A, van der Spek, Peter J, Jansen, Ruud, Hays, John P, Stubbs, Andrew P
Publicado 2018

Huvariome: a web server resource of whole genome next-generation sequencing allelic frequencies to aid in pathological candidate gene selection

por Stubbs, Andrew, McClellan, Elizabeth A, Horsman, Sebastiaan, Hiltemann, Saskia D, Palli, Ivo, Nouwens, Stephan, Koning, Anton HJ, Hoogland, Frits, Reumers, Joke, Heijsman, Daphne, Swagemakers, Sigrid, Kremer, Andreas, Meijerink, Jules, Lambrechts, Diether, van der Spek, Peter J
Publicado 2012

Comparison of Illumina versus Nanopore 16S rRNA Gene Sequencing of the Human Nasal Microbiota

por Heikema, Astrid P., Horst-Kreft, Deborah, Boers, Stefan A., Jansen, Rick, Hiltemann, Saskia D., de Koning, Willem, Kraaij, Robert, de Ridder, Maria A. J., van Houten, Chantal B., Bont, Louis J., Stubbs, Andrew P., Hays, John P.
Publicado 2020

The diagnostic value of nasal microbiota and clinical parameters in a multi-parametric prediction model to differentiate bacterial versus viral infections in lower respiratory trac...

por Li, Yunlei, van Houten, Chantal B., Boers, Stefan A., Jansen, Ruud, Cohen, Asi, Engelhard, Dan, Kraaij, Robert, Hiltemann, Saskia D., Ju, Jie, Fernández, David, Mankoc, Cristian, González, Eva, de Waal, Wouter J., de Winter-de Groot, Karin M., Wolfs, Tom F. W., Meijers, Pieter, Luijk, Bart, Oosterheert, Jan Jelrik, Sankatsing, Sanjay U. C., Bossink, Aik W. J., Stein, Michal, Klein, Adi, Ashkar, Jalal, Bamberger, Ellen, Srugo, Isaac, Odeh, Majed, Dotan, Yaniv, Boico, Olga, Etshtein, Liat, Paz, Meital, Navon, Roy, Friedman, Tom, Simon, Einav, Gottlieb, Tanya M., Pri-Or, Ester, Kronenfeld, Gali, Oved, Kfir, Eden, Eran, Stubbs, Andrew P., Bont, Louis J., Hays, John P.
Publicado 2022