A de novo next generation genomic sequence assembler based on string graph and MapReduce cloud computing framework

por Chang, Yu-Jung, Chen, Chien-Chih, Chen, Chuen-Liang, Ho, Jan-Ming
Publicado 2012

SQUAT: a Sequencing Quality Assessment Tool for data quality assessments of genome assemblies

por Yang, Li-An, Chang, Yu-Jung, Chen, Shu-Hwa, Lin, Chung-Yen, Ho, Jan-Ming
Publicado 2019

Enhancing De Novo Transcriptome Assembly by Incorporating Multiple Overlap Sizes

por Chen, Chien-Chih, Lin, Wen-Dar, Chang, Yu-Jung, Chen, Chuen-Liang, Ho, Jan-Ming
Publicado 2012

Bio301: A Web-Based EST Annotation Pipeline That Facilitates Functional Comparison Studies

por Chen, Yen-Chen, Chen, Yun-Ching, Lin, Wen-Dar, Hsiao, Chung-Der, Chiu, Hung-Wen, Ho, Jan-Ming
Publicado 2011

Subset selection of high-depth next generation sequencing reads for de novo genome assembly using MapReduce framework

por Fang, Chih-Hao, Chang, Yu-Jung, Chung, Wei-Chun, Hsieh, Ping-Heng, Lin, Chung-Yen, Ho, Jan-Ming
Publicado 2015

EpiMOLAS: an intuitive web-based framework for genome-wide DNA methylation analysis

por Su, Sheng-Yao, Lu, I-Hsuan, Cheng, Wen-Chih, Chung, Wei-Chun, Chen, Pao-Yang, Ho, Jan-Ming, Chen, Shu-Hwa, Lin, Chung-Yen
Publicado 2020

CloudDOE: A User-Friendly Tool for Deploying Hadoop Clouds and Analyzing High-Throughput Sequencing Data with MapReduce

por Chung, Wei-Chun, Chen, Chien-Chih, Ho, Jan-Ming, Lin, Chung-Yen, Hsu, Wen-Lian, Wang, Yu-Chun, Lee, D. T., Lai, Feipei, Huang, Chih-Wei, Chang, Yu-Jung
Publicado 2014