How dietary arachidonic- and docosahexaenoic- acid rich oils differentially affect the murine hepatic transcriptome

por Berger, Alvin, Roberts, Matthew A, Hoff, Bruce
Publicado 2006

Bayesian Network Reconstruction Using Systems Genetics Data: Comparison of MCMC Methods

por Tasaki, Shinya, Sauerwine, Ben, Hoff, Bruce, Toyoshiba, Hiroyoshi, Gaiteri, Chris, Chaibub Neto, Elias
Publicado 2015

Reproducible biomedical benchmarking in the cloud: lessons from crowd-sourced data challenges

por Ellrott, Kyle, Buchanan, Alex, Creason, Allison, Mason, Michael, Schaffter, Thomas, Hoff, Bruce, Eddy, James, Chilton, John M., Yu, Thomas, Stuart, Joshua M., Saez-Rodriguez, Julio, Stolovitzky, Gustavo, Boutros, Paul C., Guinney, Justin
Publicado 2019

Summary of the DREAM8 Parameter Estimation Challenge: Toward Parameter Identification for Whole-Cell Models

por Karr, Jonathan R., Williams, Alex H., Zucker, Jeremy D., Raue, Andreas, Steiert, Bernhard, Timmer, Jens, Kreutz, Clemens, Wilkinson, Simon, Allgood, Brandon A., Bot, Brian M., Hoff, Bruce R., Kellen, Michael R., Covert, Markus W., Stolovitzky, Gustavo A., Meyer, Pablo
Publicado 2015

Centralizing neurofibromatosis experimental tool knowledge with the NF Research Tools Database

por Clayton, Ashley, DeFelice, Mialy, Zalmanek, Brynn, Hodgson, Jay, Morin, Caroline, Simon, Stockard, Bletz, Julie A, Eddy, James A, Nikolov, Milen, Banerjee, Jineta, Vinnakota, Kalyan, Marasca, Marco, Boske, Kevin J, Hoff, Bruce, Bradic, Ljubomir, Kim, YooRi, Goss, James R, Allaway, Robert J
Publicado 2022

DREAMTools: a Python package for scoring collaborative challenges

por Cokelaer, Thomas, Bansal, Mukesh, Bare, Christopher, Bilal, Erhan, Bot, Brian M., Chaibub Neto, Elias, Eduati, Federica, de la Fuente, Alberto, Gönen, Mehmet, Hill, Steven M., Hoff, Bruce, Karr, Jonathan R., Küffner, Robert, Menden, Michael P., Meyer, Pablo, Norel, Raquel, Pratap, Abhishek, Prill, Robert J., Weirauch, Matthew T., Costello, James C., Stolovitzky, Gustavo, Saez-Rodriguez, Julio
Publicado 2016

Stratification of amyotrophic lateral sclerosis patients: a crowdsourcing approach

por Kueffner, Robert, Zach, Neta, Bronfeld, Maya, Norel, Raquel, Atassi, Nazem, Balagurusamy, Venkat, Di Camillo, Barbara, Chio, Adriano, Cudkowicz, Merit, Dillenberger, Donna, Garcia-Garcia, Javier, Hardiman, Orla, Hoff, Bruce, Knight, Joshua, Leitner, Melanie L., Li, Guang, Mangravite, Lara, Norman, Thea, Wang, Liuxia, Xiao, Jinfeng, Fang, Wen-Chieh, Peng, Jian, Yang, Chen, Chang, Huan-Jui, Stolovitzky, Gustavo
Publicado 2019

Evaluation of Combined Artificial Intelligence and Radiologist Assessment to Interpret Screening Mammograms

por Schaffter, Thomas, Buist, Diana S. M., Lee, Christoph I., Nikulin, Yaroslav, Ribli, Dezső, Guan, Yuanfang, Lotter, William, Jie, Zequn, Du, Hao, Wang, Sijia, Feng, Jiashi, Feng, Mengling, Kim, Hyo-Eun, Albiol, Francisco, Albiol, Alberto, Morrell, Stephen, Wojna, Zbigniew, Ahsen, Mehmet Eren, Asif, Umar, Jimeno Yepes, Antonio, Yohanandan, Shivanthan, Rabinovici-Cohen, Simona, Yi, Darvin, Hoff, Bruce, Yu, Thomas, Chaibub Neto, Elias, Rubin, Daniel L., Lindholm, Peter, Margolies, Laurie R., McBride, Russell Bailey, Rothstein, Joseph H., Sieh, Weiva, Ben-Ari, Rami, Harrer, Stefan, Trister, Andrew, Friend, Stephen, Norman, Thea, Sahiner, Berkman, Strand, Fredrik, Guinney, Justin, Stolovitzky, Gustavo, Mackey, Lester, Cahoon, Joyce, Shen, Li, Sohn, Jae Ho, Trivedi, Hari, Shen, Yiqiu, Buturovic, Ljubomir, Pereira, Jose Costa, Cardoso, Jaime S., Castro, Eduardo, Kalleberg, Karl Trygve, Pelka, Obioma, Nedjar, Imane, Geras, Krzysztof J., Nensa, Felix, Goan, Ethan, Koitka, Sven, Caballero, Luis, Cox, David D., Krishnaswamy, Pavitra, Pandey, Gaurav, Friedrich, Christoph M., Perrin, Dimitri, Fookes, Clinton, Shi, Bibo, Cardoso Negrie, Gerard, Kawczynski, Michael, Cho, Kyunghyun, Khoo, Can Son, Lo, Joseph Y., Sorensen, A. Gregory, Jung, Hwejin
Publicado 2020

Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis

por Sieberts, Solveig K., Zhu, Fan, García-García, Javier, Stahl, Eli, Pratap, Abhishek, Pandey, Gaurav, Pappas, Dimitrios, Aguilar, Daniel, Anton, Bernat, Bonet, Jaume, Eksi, Ridvan, Fornés, Oriol, Guney, Emre, Li, Hongdong, Marín, Manuel Alejandro, Panwar, Bharat, Planas-Iglesias, Joan, Poglayen, Daniel, Cui, Jing, Falcao, Andre O., Suver, Christine, Hoff, Bruce, Balagurusamy, Venkat S. K., Dillenberger, Donna, Neto, Elias Chaibub, Norman, Thea, Aittokallio, Tero, Ammad-ud-din, Muhammad, Azencott, Chloe-Agathe, Bellón, Víctor, Boeva, Valentina, Bunte, Kerstin, Chheda, Himanshu, Cheng, Lu, Corander, Jukka, Dumontier, Michel, Goldenberg, Anna, Gopalacharyulu, Peddinti, Hajiloo, Mohsen, Hidru, Daniel, Jaiswal, Alok, Kaski, Samuel, Khalfaoui, Beyrem, Khan, Suleiman Ali, Kramer, Eric R., Marttinen, Pekka, Mezlini, Aziz M., Molparia, Bhuvan, Pirinen, Matti, Saarela, Janna, Samwald, Matthias, Stoven, Véronique, Tang, Hao, Tang, Jing, Torkamani, Ali, Vert, Jean-Phillipe, Wang, Bo, Wang, Tao, Wennerberg, Krister, Wineinger, Nathan E., Xiao, Guanghua, Xie, Yang, Yeung, Rae, Zhan, Xiaowei, Zhao, Cheng, Greenberg, Jeff, Kremer, Joel, Michaud, Kaleb, Barton, Anne, Coenen, Marieke, Mariette, Xavier, Miceli, Corinne, Shadick, Nancy, Weinblatt, Michael, de Vries, Niek, Tak, Paul P., Gerlag, Danielle, Huizinga, Tom W. J., Kurreeman, Fina, Allaart, Cornelia F., Louis Bridges Jr., S., Criswell, Lindsey, Moreland, Larry, Klareskog, Lars, Saevarsdottir, Saedis, Padyukov, Leonid, Gregersen, Peter K., Friend, Stephen, Plenge, Robert, Stolovitzky, Gustavo, Oliva, Baldo, Guan, Yuanfang, Mangravite, Lara M.
Publicado 2016

Erratum: Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis

por Sieberts, Solveig K., Zhu, Fan, García-García, Javier, Stahl, Eli, Pratap, Abhishek, Pandey, Gaurav, Pappas, Dimitrios, Aguilar, Daniel, Anton, Bernat, Bonet, Jaume, Eksi, Ridvan, Fornés, Oriol, Guney, Emre, Li, Hongdong, Marín, Manuel Alejandro, Panwar, Bharat, Planas-Iglesias, Joan, Poglayen, Daniel, Cui, Jing, Falcao, Andre O., Suver, Christine, Hoff, Bruce, Balagurusamy, Venkat S. K., Dillenberger, Donna, Neto, Elias Chaibub, Norman, Thea, Aittokallio, Tero, Ammad-ud-din, Muhammad, Azencott, Chloe-Agathe, Bellón, Víctor, Boeva, Valentina, Bunte, Kerstin, Chheda, Himanshu, Cheng, Lu, Corander, Jukka, Dumontier, Michel, Goldenberg, Anna, Gopalacharyulu, Peddinti, Hajiloo, Mohsen, Hidru, Daniel, Jaiswal, Alok, Kaski, Samuel, Khalfaoui, Beyrem, Khan, Suleiman Ali, Kramer, Eric R., Marttinen, Pekka, Mezlini, Aziz M., Molparia, Bhuvan, Pirinen, Matti, Saarela, Janna, Samwald, Matthias, Stoven, Véronique, Tang, Hao, Tang, Jing, Torkamani, Ali, Vert, Jean-Phillipe, Wang, Bo, Wang, Tao, Wennerberg, Krister, Wineinger, Nathan E., Xiao, Guanghua, Xie, Yang, Yeung, Rae, Zhan, Xiaowei, Zhao, Cheng, Greenberg, Jeff, Kremer, Joel, Michaud, Kaleb, Barton, Anne, Coenen, Marieke, Mariette, Xavier, Miceli, Corinne, Shadick, Nancy, Weinblatt, Michael, de Vries, Niek, Tak, Paul P., Gerlag, Danielle, Huizinga, Tom W. J., Kurreeman, Fina, Allaart, Cornelia F., Bridges Jr., S. Louis, Criswell, Lindsey, Moreland, Larry, Klareskog, Lars, Saevarsdottir, Saedis, Padyukov, Leonid, Gregersen, Peter K., Friend, Stephen, Plenge, Robert, Stolovitzky, Gustavo, Oliva, Baldo, Guan, Yuanfang, Mangravite, Lara M.
Publicado 2016