RVD: a command-line program for ultrasensitive rare single nucleotide variant detection using targeted next-generation DNA resequencing

por Cushing, Anna, Flaherty, Patrick, Hopmans, Erik, Bell, John M, Ji, Hanlee P
Publicado 2013

A programmable method for massively parallel targeted sequencing

por Hopmans, Erik S., Natsoulis, Georges, Bell, John M., Grimes, Susan M., Sieh, Weiva, Ji, Hanlee P.
Publicado 2014

A Novel Persistence Associated EBV miRNA Expression Profile Is Disrupted in Neoplasia

por Qiu, Jin, Cosmopoulos, Katherine, Pegtel, Michiel, Hopmans, Erik, Murray, Paul, Middeldorp, Jaap, Shapiro, Michael, Thorley-Lawson, David A.
Publicado 2011

A genome-wide approach for detecting novel insertion-deletion variants of mid-range size

por Xia, Li C., Sakshuwong, Sukolsak, Hopmans, Erik S., Bell, John M., Grimes, Susan M., Siegmund, David O., Ji, Hanlee P., Zhang, Nancy R.
Publicado 2016

Emergence of Hemagglutinin Mutations During the Course of Influenza Infection

por Cushing, Anna, Kamali, Amanda, Winters, Mark, Hopmans, Erik S., Bell, John M., Grimes, Susan M., Xia, Li C., Zhang, Nancy R., Moss, Ronald B., Holodniy, Mark, Ji, Hanlee P.
Publicado 2015

Profiling diverse sequence tandem repeats in colorectal cancer reveals co-occurrence of microsatellite and chromosomal instability involving Chromosome 8

por Shin, GiWon, Greer, Stephanie U., Hopmans, Erik, Grimes, Susan M., Lee, HoJoon, Zhao, Lan, Miotke, Laura, Suarez, Carlos, Almeda, Alison F., Haraldsdottir, Sigurdis, Ji, Hanlee P.
Publicado 2021

Human and mouse oligonucleotide-based array CGH

por van den IJssel, Paul, Tijssen, Marianne, Chin, Suet-Feung, Eijk, Paul, Carvalho, Beatriz, Hopmans, Erik, Holstege, Henne, Bangarusamy, Dhinoth Kumar, Jonkers, Jos, Meijer, Gerrit A., Caldas, Carlos, Ylstra, Bauke
Publicado 2005

Metastatic tumor evolution and organoid modeling implicate TGFBR2 as a cancer driver in diffuse gastric cancer

por Nadauld, Lincoln D, Garcia, Sarah, Natsoulis, Georges, Bell, John M, Miotke, Laura, Hopmans, Erik S, Xu, Hua, Pai, Reetesh K, Palm, Curt, Regan, John F, Chen, Hao, Flaherty, Patrick, Ootani, Akifumi, Zhang, Nancy R, Ford, James M, Kuo, Calvin J, Ji, Hanlee P
Publicado 2014

Haplotyping germline and cancer genomes using high-throughput linked-read sequencing

por Zheng, Grace X.Y., Lau, Billy T., Schnall-Levin, Michael, Jarosz, Mirna, Bell, John M., Hindson, Christopher M., Kyriazopoulou-Panagiotopoulou, Sofia, Masquelier, Donald A., Merrill, Landon, Terry, Jessica M., Mudivarti, Patrice A., Wyatt, Paul W., Bharadwaj, Rajiv, Makarewicz, Anthony J., Li, Yuan, Belgrader, Phillip, Price, Andrew D., Lowe, Adam J., Marks, Patrick, Vurens, Gerard M., Hardenbol, Paul, Montesclaros, Luz, Luo, Melissa, Greenfield, Lawrence, Wong, Alexander, Birch, David E., Short, Steven W., Bjornson, Keith P., Patel, Pranav, Hopmans, Erik S., Wood, Christina, Kaur, Sukhvinder, Lockwood, Glenn K., Stafford, David, Delaney, Joshua P., Wu, Indira, Ordonez, Heather S., Grimes, Susan M., Greer, Stephanie, Lee, Josephine Y., Belhocine, Kamila, Giorda, Kristina M., Heaton, William H., McDermott, Geoffrey P., Bent, Zachary W., Meschi, Francesca, Kondov, Nikola O., Wilson, Ryan, Bernate, Jorge A., Gauby, Shawn, Kindwall, Alex, Bermejo, Clara, Fehr, Adrian N., Chan, Adrian, Saxonov, Serge, Ness, Kevin D., Hindson, Benjamin J., Ji, Hanlee P.
Publicado 2016