RNA trafficking and subcellular localization—a review of mechanisms, experimental and predictive methodologies

por Wang, Jun, Horlacher, Marc, Cheng, Lixin, Winther, Ole
Publicado 2023

Transfer learning identifies sequence determinants of cell-type specific regulatory element accessibility

por Salvatore, Marco, Horlacher, Marc, Marsico, Annalisa, Winther, Ole, Andersson, Robin
Publicado 2023

A systematic benchmark of machine learning methods for protein–RNA interaction prediction

por Horlacher, Marc, Cantini, Giulia, Hesse, Julian, Schinke, Patrick, Goedert, Nicolas, Londhe, Shubhankar, Moyon, Lambert, Marsico, Annalisa
Publicado 2023

Towards in silico CLIP-seq: predicting protein-RNA interaction via sequence-to-signal learning

por Horlacher, Marc, Wagner, Nils, Moyon, Lambert, Kuret, Klara, Goedert, Nicolas, Salvatore, Marco, Ule, Jernej, Gagneur, Julien, Winther, Ole, Marsico, Annalisa
Publicado 2023

A computational map of the human-SARS-CoV-2 protein–RNA interactome predicted at single-nucleotide resolution

por Horlacher, Marc, Oleshko, Svitlana, Hu, Yue, Ghanbari, Mahsa, Cantini, Giulia, Schinke, Patrick, Vergara, Ernesto Elorduy, Bittner, Florian, Mueller, Nikola S, Ohler, Uwe, Moyon, Lambert, Marsico, Annalisa
Publicado 2023

SND1 binds SARS-CoV-2 negative-sense RNA and promotes viral RNA synthesis through NSP9

por Schmidt, Nora, Ganskih, Sabina, Wei, Yuanjie, Gabel, Alexander, Zielinski, Sebastian, Keshishian, Hasmik, Lareau, Caleb A., Zimmermann, Liv, Makroczyova, Jana, Pearce, Cadence, Krey, Karsten, Hennig, Thomas, Stegmaier, Sebastian, Moyon, Lambert, Horlacher, Marc, Werner, Simone, Aydin, Jens, Olguin-Nava, Marco, Potabattula, Ramya, Kibe, Anuja, Dölken, Lars, Smyth, Redmond P., Caliskan, Neva, Marsico, Annalisa, Krempl, Christine, Bodem, Jochen, Pichlmair, Andreas, Carr, Steven A., Chlanda, Petr, Erhard, Florian, Munschauer, Mathias
Publicado 2023