Sex-dependent transcription of cardiac electrophysiology and links to acetylation modifiers based on the GTEx database

por Pressler, Michael P., Horvath, Anelia, Entcheva, Emilia
Publicado 2022

Identification of Novel Gene Targets and Functions of p21-Activated Kinase 1 during DNA Damage by Gene Expression Profiling

por Motwani, Mona, Li, Da-Qiang, Horvath, Anelia, Kumar, Rakesh
Publicado 2013

Genomic Insights into Triple-Negative and HER2-Positive Breast Cancers Using Isogenic Model Systems

por Mudvari, Prakriti, Ohshiro, Kazufumi, Nair, Vasudha, Horvath, Anelia, Kumar, Rakesh
Publicado 2013

SCExecute: custom cell barcode-stratified analyses of scRNA-seq data

por Edwards, Nathan, Dillard, Christian, Prashant, N M, Hongyu, Liu, Yang, Mia, Ulianova, Evgenia, Horvath, Anelia
Publicado 2022

Improved SNV Discovery in Barcode-Stratified scRNA-seq Alignments

por N. M., Prashant, Liu, Hongyu, Dillard, Christian, Ibeawuchi, Helen, Alsaeedy, Turkey, Chan, Hang, Horvath, Anelia Dafinova
Publicado 2021

Dysregulated metabolic pathways in age-related macular degeneration

por Zhang, Meng, Jiang, Nisi, Chu, Yi, Postnikova, Olga, Varghese, Rency, Horvath, Anelia, Cheema, Amrita K., Golestaneh, Nady
Publicado 2020

SCReadCounts: estimation of cell-level SNVs expression from scRNA-seq data

por Prashant, N. M., Alomran, Nawaf, Chen, Yu, Liu, Hongyu, Bousounis, Pavlos, Movassagh, Mercedeh, Edwards, Nathan, Horvath, Anelia
Publicado 2021

GeTallele: A Method for Analysis of DNA and RNA Allele Frequency Distributions

por Słowiński, Piotr, Li, Muzi, Restrepo, Paula, Alomran, Nawaf, Spurr, Liam F., Miller, Christian, Tsaneva-Atanasova, Krasimira, Horvath, Anelia
Publicado 2020

Estimating the Allele-Specific Expression of SNVs From 10× Genomics Single-Cell RNA-Sequencing Data

por N. M., Prashant, Liu, Hongyu, Bousounis, Pavlos, Spurr, Liam, Alomran, Nawaf, Ibeawuchi, Helen, Sein, Justin, Reece-Stremtan, Dacian, Horvath, Anelia
Publicado 2020

Evaluation of an angiotensin Type 1 receptor blocker on the reconsolidation of fear memory

por Swiercz, Adam P., Iyer, Laxmi, Yu, Zhe, Edwards, Allison, Prashant, N. M., Nguyen, Bryan N., Horvath, Anelia, Marvar, Paul J.
Publicado 2020

scReQTL: an approach to correlate SNVs to gene expression from individual scRNA-seq datasets

por Liu, Hongyu, Prashant, N. M., Spurr, Liam F., Bousounis, Pavlos, Alomran, Nawaf, Ibeawuchi, Helen, Sein, Justin, Słowiński, Piotr, Tsaneva-Atanasova, Krasimira, Horvath, Anelia
Publicado 2021

Selective disruption of trigeminal sensory neurogenesis and differentiation in a mouse model of 22q11.2 deletion syndrome

por Karpinski, Beverly A., Maynard, Thomas M., Bryan, Corey A., Yitsege, Gelila, Horvath, Anelia, Lee, Norman H., Moody, Sally A., LaMantia, Anthony-Samuel
Publicado 2021

Systematic pan-cancer analysis of somatic allele frequency

por Spurr, Liam, Li, Muzi, Alomran, Nawaf, Zhang, Qianqian, Restrepo, Paula, Movassagh, Mercedeh, Trenkov, Chris, Tunnessen, Nerissa, Apanasovich, Tatiyana, Crandall, Keith A., Edwards, Nathan, Horvath, Anelia
Publicado 2018

RNA sequencing of cancer reveals novel splicing alterations

por Eswaran, Jeyanthy, Horvath, Anelia, Godbole, Sucheta, Reddy, Sirigiri Divijendra, Mudvari, Prakriti, Ohshiro, Kazufumi, Cyanam, Dinesh, Nair, Sujit, Fuqua, Suzanne A. W., Polyak, Kornelia, Florea, Liliana D., Kumar, Rakesh
Publicado 2013

Overexpressed somatic alleles are enriched in functional elements in Breast Cancer

por Restrepo, Paula, Movassagh, Mercedeh, Alomran, Nawaf, Miller, Christian, Li, Muzi, Trenkov, Chris, Manchev, Yulian, Bahl, Sonali, Warnken, Stephanie, Spurr, Liam, Apanasovich, Tatiyana, Crandall, Keith, Edwards, Nathan, Horvath, Anelia
Publicado 2017

RNA2DNAlign: nucleotide resolution allele asymmetries through quantitative assessment of RNA and DNA paired sequencing data

por Movassagh, Mercedeh, Alomran, Nawaf, Mudvari, Prakriti, Dede, Merve, Dede, Cem, Kowsari, Kamran, Restrepo, Paula, Cauley, Edmund, Bahl, Sonali, Li, Muzi, Waterhouse, Wesley, Tsaneva-Atanasova, Krasimira, Edwards, Nathan, Horvath, Anelia
Publicado 2016

Extracellular vesicles carrying HIV-1 Nef induce long-term hyperreactivity of myeloid cells

por Dubrovsky, Larisa, Brichacek, Beda, Prashant, N.M., Pushkarsky, Tatiana, Mukhamedova, Nigora, Fleetwood, Andrew J., Xu, Yangsong, Dragoljevic, Dragana, Fitzgerald, Michael, Horvath, Anelia, Murphy, Andrew J., Sviridov, Dmitri, Bukrinsky, Michael I.
Publicado 2022

Novel Insights into Breast Cancer Genetic Variance through RNA Sequencing

por Horvath, Anelia, Pakala, Suresh Babu, Mudvari, Prakriti, Reddy, Sirigiri Divijendra Natha, Ohshiro, Kazufumi, Casimiro, Sandra, Pires, Ricardo, Fuqua, Suzanne A. W., Toi, Masakazu, Costa, Luis, Nair, Sujit S., Sukumar, Saraswati, Kumar, Rakesh
Publicado 2013

ReQTL: identifying correlations between expressed SNVs and gene expression using RNA-sequencing data

por Spurr, Liam F, Alomran, Nawaf, Bousounis, Pavlos, Reece-Stremtan, Dacian, Prashant, N M, Liu, Hongyu, Słowiński, Piotr, Li, Muzi, Zhang, Qianqian, Sein, Justin, Asher, Gabriel, Crandall, Keith A, Tsaneva-Atanasova, Krasimira, Horvath, Anelia
Publicado 2020

Exosomes containing HIV protein Nef reorganize lipid rafts potentiating inflammatory response in bystander cells

por Mukhamedova, Nigora, Hoang, Anh, Dragoljevic, Dragana, Dubrovsky, Larisa, Pushkarsky, Tatiana, Low, Hann, Ditiatkovski, Michael, Fu, Ying, Ohkawa, Ryunosuke, Meikle, Peter J., Horvath, Anelia, Brichacek, Beda, Miller, Yury I., Murphy, Andrew, Bukrinsky, Michael, Sviridov, Dmitri
Publicado 2019