Phylogenomic Analysis of Marine Roseobacters

por Tang, Kai, Huang, Hongzhan, Jiao, Nianzhi, Wu, Cathy H.
Publicado 2010

Software for pre-processing Illumina next-generation sequencing short read sequences

por Chen, Chuming, Khaleel, Sari S, Huang, Hongzhan, Wu, Cathy H
Publicado 2014

Structural and functional studies of S-adenosyl-L-methionine binding proteins: a ligand-centric approach

por Gana, Rajaram, Rao, Shruti, Huang, Hongzhan, Wu, Cathy, Vasudevan, Sona
Publicado 2013

Protein Bioinformatics Infrastructure for the Integration and Analysis of Multiple High-Throughput “omics” Data

por Chen, Chuming, McGarvey, Peter B., Huang, Hongzhan, Wu, Cathy H.
Publicado 2010

Transcription factors and genetic circuits orchestrating the complex, multilayered response of Clostridium acetobutylicum to butanol and butyrate stress

por Wang, Qinghua, Venkataramanan, Keerthi Prasad, Huang, Hongzhan, Papoutsakis, Eleftherios T, Wu, Cathy H
Publicado 2013

Construction of protein phosphorylation networks by data mining, text mining and ontology integration: analysis of the spindle checkpoint

por Ross, Karen E., Arighi, Cecilia N., Ren, Jia, Huang, Hongzhan, Wu, Cathy H.
Publicado 2013

PIRSF Family Classification System for Protein Functional and Evolutionary Analysis

por Nikolskaya, Anastasia N., Arighi, Cecilia N., Huang, Hongzhan, Barker, Winona C., Wu, Cathy H.
Publicado 2007

UniRef clusters: a comprehensive and scalable alternative for improving sequence similarity searches

por Suzek, Baris E., Wang, Yuqi, Huang, Hongzhan, McGarvey, Peter B., Wu, Cathy H.
Publicado 2015

Use of the Protein Ontology for Multi-Faceted Analysis of Biological Processes: A Case Study of the Spindle Checkpoint

por Ross, Karen E., Arighi, Cecilia N., Ren, Jia, Natale, Darren A., Huang, Hongzhan, Wu, Cathy H.
Publicado 2013

Representative Proteomes: A Stable, Scalable and Unbiased Proteome Set for Sequence Analysis and Functional Annotation

por Chen, Chuming, Natale, Darren A., Finn, Robert D., Huang, Hongzhan, Zhang, Jian, Wu, Cathy H., Mazumder, Raja
Publicado 2011

Proteomic profiling of retina and retinal pigment epithelium combined embryonic tissue to facilitate ocular disease gene discovery

por Aryal, Sandeep, Anand, Deepti, Huang, Hongzhan, Reddy, Ashok P., Wilmarth, Phillip A., David, Larry L., Lachke, Salil A.
Publicado 2023

UniProt genomic mapping for deciphering functional effects of missense variants

por McGarvey, Peter B., Nightingale, Andrew, Luo, Jie, Huang, Hongzhan, Martin, Maria J., Wu, Cathy, Consortium, UniProt
Publicado 2019

A framework for biomedical figure segmentation towards image-based document retrieval

por Lopez, Luis D, Yu, Jingyi, Arighi, Cecilia, Tudor, Catalina O, Torii, Manabu, Huang, Hongzhan, Vijay-Shanker, K, Wu, Cathy
Publicado 2013

Transcriptional profiling of liver during the critical embryo-to-hatchling transition period in the chicken (Gallus gallus)

por Cogburn, Larry A., Trakooljul, Nares, Chen, Chuming, Huang, Hongzhan, Wu, Cathy H., Carré, Wilfrid, Wang, Xiaofei, White, Harold B.
Publicado 2018

Protein ontology on the semantic web for knowledge discovery

por Chen, Chuming, Huang, Hongzhan, Ross, Karen E., Cowart, Julie E., Arighi, Cecilia N., Wu, Cathy H., Natale, Darren A.
Publicado 2020

PIRSitePredict for protein functional site prediction using position-specific rules

por Chen, Chuming, Wang, Qinghua, Huang, Hongzhan, Vinayaka, Cholanayakanahalli R, Garavelli, John S, Arighi, Cecilia N, Natale, Darren A, Wu, Cathy H
Publicado 2019

A crowdsourcing open platform for literature curation in UniProt

por Wang, Yuqi, Wang, Qinghua, Huang, Hongzhan, Huang, Wei, Chen, Yongxing, McGarvey, Peter B., Wu, Cathy H., Arighi, Cecilia N.
Publicado 2021

iSyTE 2.0: a database for expression-based gene discovery in the eye

por Kakrana, Atul, Yang, Andrian, Anand, Deepti, Djordjevic, Djordje, Ramachandruni, Deepti, Singh, Abhyudai, Huang, Hongzhan, Ho, Joshua W K, Lachke, Salil A
Publicado 2018

TnCentral: a Prokaryotic Transposable Element Database and Web Portal for Transposon Analysis

por Ross, Karen, Varani, Alessandro M., Snesrud, Erik, Huang, Hongzhan, Alvarenga, Danillo Oliveira, Zhang, Jian, Wu, Cathy, McGann, Patrick, Chandler, Mick
Publicado 2021

miR-31-mediated local translation at the mitotic spindle is important for early development

por Remsburg, Carolyn M., Konrad, Kalin, Stepicheva, Nadezda, Testa, Michael, Lee, Kelvin, Choe, Leila, Polson, Shawn, Bhavsar, Jaysheel, Huang, Hongzhan, Song, Jia L.
Publicado 2023