COVID-19 coronavirus vaccine design using reverse vaccinology and machine learning

por Ong, Edison, Wong, Mei U, Huffman, Anthony, He, Yongqun
Publicado 2020

COVID-19 Coronavirus Vaccine Design Using Reverse Vaccinology and Machine Learning

por Ong, Edison, Wong, Mei U, Huffman, Anthony, He, Yongqun
Publicado 2020

CIDO ontology updates and secondary analysis of host responses to COVID-19 infection based on ImmPort reports and literature

por Huffman, Anthony, Masci, Anna Maria, Zheng, Jie, Sanati, Nasim, Brunson, Timothy, Wu, Guanming, He, Yongqun
Publicado 2021

Cov19VaxKB: A web-based integrative COVID-19 vaccine knowledge base

por Huang, Philip C., Goru, Rohit, Huffman, Anthony, Yu Lin, Asiyah, Cooke, Michael F., He, Yongqun
Publicado 2021

VIGET: A web portal for study of vaccine-induced host responses based on Reactome pathways and ImmPort data

por Brunson, Timothy, Sanati, Nasim, Huffman, Anthony, Masci, Anna Maria, Zheng, Jie, Cooke, Michael F., Conley, Patrick, He, Yongqun, Wu, Guanming
Publicado 2023

Vaxign2: the second generation of the first Web-based vaccine design program using reverse vaccinology and machine learning

por Ong, Edison, Cooke, Michael F, Huffman, Anthony, Xiang, Zuoshuang, Wong, Mei U, Wang, Haihe, Seetharaman, Meenakshi, Valdez, Ninotchka, He, Yongqun
Publicado 2021

CIDO, a community-based ontology for coronavirus disease knowledge and data integration, sharing, and analysis

por He, Yongqun, Yu, Hong, Ong, Edison, Wang, Yang, Liu, Yingtong, Huffman, Anthony, Huang, Hsin-hui, Beverley, John, Hur, Junguk, Yang, Xiaolin, Chen, Luonan, Omenn, Gilbert S., Athey, Brian, Smith, Barry
Publicado 2020

VaximmutorDB: A Web-Based Vaccine Immune Factor Database and Its Application for Understanding Vaccine-Induced Immune Mechanisms

por Berke, Kimberly, Sun, Peter, Ong, Edison, Sanati, Nasim, Huffman, Anthony, Brunson, Timothy, Loney, Fred, Ostrow, Joseph, Racz, Rebecca, Zhao, Bin, Xiang, Zuoshuang, Masci, Anna Maria, Zheng, Jie, Wu, Guanming, He, Yongqun
Publicado 2021

A new framework for host-pathogen interaction research

por Yu, Hong, Li, Li, Huffman, Anthony, Beverley, John, Hur, Junguk, Merrell, Eric, Huang, Hsin-hui, Wang, Yang, Liu, Yingtong, Ong, Edison, Cheng, Liang, Zeng, Tao, Zhang, Jingsong, Li, Pengpai, Liu, Zhiping, Wang, Zhigang, Zhang, Xiangyan, Ye, Xianwei, Handelman, Samuel K., Sexton, Jonathan, Eaton, Kathryn, Higgins, Gerry, Omenn, Gilbert S., Athey, Brian, Smith, Barry, Chen, Luonan, He, Yongqun
Publicado 2022

A comprehensive update on CIDO: the community-based coronavirus infectious disease ontology

por He, Yongqun, Yu, Hong, Huffman, Anthony, Lin, Asiyah Yu, Natale, Darren A., Beverley, John, Zheng, Ling, Perl, Yehoshua, Wang, Zhigang, Liu, Yingtong, Ong, Edison, Wang, Yang, Huang, Philip, Tran, Long, Du, Jinyang, Shah, Zalan, Shah, Easheta, Desai, Roshan, Huang, Hsin-hui, Tian, Yujia, Merrell, Eric, Duncan, William D., Arabandi, Sivaram, Schriml, Lynn M., Zheng, Jie, Masci, Anna Maria, Wang, Liwei, Liu, Hongfang, Smaili, Fatima Zohra, Hoehndorf, Robert, Pendlington, Zoë May, Roncaglia, Paola, Ye, Xianwei, Xie, Jiangan, Tang, Yi-Wei, Yang, Xiaolin, Peng, Suyuan, Zhang, Luxia, Chen, Luonan, Hur, Junguk, Omenn, Gilbert S., Athey, Brian, Smith, Barry
Publicado 2022

Complete Genome Sequences of Cluster G Mycobacteriophage Darionha, Cluster A Mycobacteriophage Salz, and Cluster J Mycobacteriophage ThreeRngTarjay

por Sandoval, Andrea M., Abram, Amber M., Alhabib, Zahraa M., Antonyan, Angelina S., Brikho, Salar M., Buhay, Sarah I., Craig, Griffin E., Crile, Karen G., El Yaman, Nour, Garcia-Leon, Lizbeth, Hammoud, Zahraa B., Huffman, Anthony R., Issa, Ali H., Jackman, Alexander B., Krajcz, Victoria K., Lloyd, Yamiya J., Jones, Marcel L., McMahon, Diana L., Murdock, Briana A. D., Nelson, Jada J., Patel, Tulsi T., Patil, Yashodhara V., Ricketts, Sabriyyah A., Romero-Barajas, Leonardo S., Sareini, Laila H., Sesoko, Channing S., Shammami, Marcelio A., Sheardy, Erin E., Sherwood, John R., Simpson, Arren E., Tiba, Racha H., Conant, Stephanie B., Finkel, Jonathan S., Kagey, Jacob D.
Publicado 2020

The mapping of Drosophila melanogaster mutant A.4.4

por Bieser, Kayla L., Stamm, Joyce, Aldo, Ayala A., Bhaskara, Suneil, Clairborne, Makayla, Coronel Gómez, Joselyn N., Dean, Ron, Dowell, Aaron, Dowell, Evan, Eissa, Mathew, Fawaz, Ahmad A., Fouad-Meshriky, Michael M., Godoy, Dustin, Gonzalez, Krista, Hachem, Malak K., Hammoud, Malak F., Huffman, Anthony, Ingram, Hunter, Jackman, Alex B., Karki, Bibek, Khalil, Natalia, Khalil, Houda, Ha, Tran Khanh, Kharel, Arjun, Kobylarz, Izabell, Lomprey, Hunter, Lonnberg, Adam, Mahbuba, Safa, Massarani, Hend, Minster, Madeline, Molina, Krystina, Molitor, Lynette, Murray, Taylor, Patel, Payal M., Pechulis, Sydney, Raja, Architha, Rastegari, Gladys, Reeves, Skylar, Sabu, Niveda, Salazar, Rafael, Schulert, Devan, Senopole, Matthew D., Sportiello, Kristen, Torres, Claudia, Villalobos, Jade, Wu, Joseph, Zeigler, Stacy, Kagey, Jacob D.
Publicado 2018

Complete Genome Sequences of Cluster A Mycobacteriophages BobSwaget, Fred313, KADY, Lokk, MyraDee, Stagni, and StepMih

por Butela, Kristen A., Gurney, Susan M. R., Hendrickson, Heather L., LeBlanc-Straceski, Janine M., Zimmerman, Anastasia M., Conant, Stephanie B., Freed, Nikki E., Silander, Olin K., Thomson, Joshua J., Berkes, Charlotte A., Bertolez, Cristina, Davies, Courtney G., Elinsky, Amber, Hanlon, Alison J., Nersesyan, Juliette, Patel, Payal, Sherwood, John, Tieu Ngo, Tiffany, Wisniewski, Kathryn A., Yacoo, Kathrine, Arendse, Paul M., Bowlen, Nathan W., Cunmulaj, Jasmina, Downs, Julie L., Ferrenberg, Charlee A., Gassman, Alexandra E., Gilligan, Cody E. R., Gorkiewicz, Emily, Harness, Christopher, Huffman, Anthony, Jones, Christina, Julien, Anna, Kupic, Alexis E., Latu, Sayonara F., Manning, Thomas J., Maxwell, Danielle, Meyer, Catherine E., Reardon, Madeleine, Slaughter, Matthew, Swasey, Royce, Tennent, Rebecca I., Torres, Victoria, Waller, Tamia, Worcester, Rachel M., Yost, Brooke L., Cresawn, Steven G., Garlena, Rebecca A., Jacobs-Sera, Deborah, Pope, Welkin H., Russell, Daniel A., Hatfull, Graham F., Kagey, Jacob D.
Publicado 2017