Comparative genomics provides insight into maize adaptation in temperate regions

por Hufford, Matthew B.
Publicado 2016

SequelTools: a suite of tools for working with PacBio Sequel raw sequence data

por Hufnagel, David E., Hufford, Matthew B., Seetharam, Arun S.
Publicado 2020

Complex Patterns of Local Adaptation in Teosinte

por Pyhäjärvi, Tanja, Hufford, Matthew B., Mezmouk, Sofiane, Ross-Ibarra, Jeffrey
Publicado 2013

Genome Size and Transposable Element Content as Determined by High-Throughput Sequencing in Maize and Zea luxurians

por Tenaillon, Maud I., Hufford, Matthew B., Gaut, Brandon S., Ross-Ibarra, Jeffrey
Publicado 2011

Natural variation in teosinte at the domestication locus teosinte branched1 (tb1)

por Vann, Laura, Kono, Thomas, Pyhäjärvi, Tanja, Hufford, Matthew B., Ross-Ibarra, Jeffrey
Publicado 2015

Evidence for a Unique DNA-Dependent RNA Polymerase in Cereal Crops

por Trujillo, Joshua T, Seetharam, Arun S, Hufford, Matthew B, Beilstein, Mark A, Mosher, Rebecca A
Publicado 2018

How the pan-genome is changing crop genomics and improvement

por Della Coletta, Rafael, Qiu, Yinjie, Ou, Shujun, Hufford, Matthew B., Hirsch, Candice N.
Publicado 2021

Inferences from the Historical Distribution of Wild and Domesticated Maize Provide Ecological and Evolutionary Insight

por Hufford, Matthew B., Martínez-Meyer, Enrique, Gaut, Brandon S., Eguiarte, Luis E., Tenaillon, Maud I.
Publicado 2012

The Genomic Signature of Crop-Wild Introgression in Maize

por Hufford, Matthew B., Lubinksy, Pesach, Pyhäjärvi, Tanja, Devengenzo, Michael T., Ellstrand, Norman C., Ross-Ibarra, Jeffrey
Publicado 2013

Correction: The Genomic Signature of Crop-Wild Introgression in Maize

por Hufford, Matthew B., Lubinksy, Pesach, Pyhäjärvi, Tanja, Devengenzo, Michael T., Ellstrand, Norman C., Ross-Ibarra, Jeffrey
Publicado 2013

The potential role of genetic assimilation during maize domestication

por Lorant, Anne, Pedersen, Sarah, Holst, Irene, Hufford, Matthew B., Winter, Klaus, Piperno, Dolores, Ross-Ibarra, Jeffrey
Publicado 2017

The interplay of demography and selection during maize domestication and expansion

por Wang, Li, Beissinger, Timothy M., Lorant, Anne, Ross-Ibarra, Claudia, Ross-Ibarra, Jeffrey, Hufford, Matthew B.
Publicado 2017

The Streptochaeta Genome and the Evolution of the Grasses

por Seetharam, Arun S., Yu, Yunqing, Bélanger, Sébastien, Clark, Lynn G., Meyers, Blake C., Kellogg, Elizabeth A., Hufford, Matthew B.
Publicado 2021

Genomic abundance is not predictive of tandem repeat localization in grass genomes

por Bilinski, Paul, Han, Yonghua, Hufford, Matthew B., Lorant, Anne, Zhang, Pingdong, Estep, Matt C., Jiang, Jiming, Ross-Ibarra, Jeffrey
Publicado 2017

Unraveling Prevalence and Effects of Deleterious Mutations in Maize Elite Lines across Decades of Modern Breeding

por Sun, Shichao, Wang, Baobao, Li, Changyu, Xu, Gen, Yang, Jinliang, Hufford, Matthew B, Ross-Ibarra, Jeffrey, Wang, Haiyang, Wang, Li
Publicado 2023

GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations

por Manchanda, Nancy, Portwood, John L., Woodhouse, Margaret R., Seetharam, Arun S., Lawrence-Dill, Carolyn J., Andorf, Carson M., Hufford, Matthew B.
Publicado 2020

Molecular Parallelism Underlies Convergent Highland Adaptation of Maize Landraces

por Wang, Li, Josephs, Emily B, Lee, Kristin M, Roberts, Lucas M, Rellán-Álvarez, Rubén, Ross-Ibarra, Jeffrey, Hufford, Matthew B
Publicado 2021

Characterization of introgression from the teosinte Zea mays ssp. mexicana to Mexican highland maize

por Gonzalez-Segovia, Eric, Pérez-Limon, Sergio, Cíntora-Martínez, G. Carolina, Guerrero-Zavala, Alejandro, Janzen, Garrett M., Hufford, Matthew B., Ross-Ibarra, Jeffrey, Sawers, Ruairidh J. H.
Publicado 2019

Allele-specific Expression Reveals Multiple Paths to Highland Adaptation in Maize

por Hu, Haixiao, Crow, Taylor, Nojoomi, Saghi, Schulz, Aimee J, Estévez-Palmas, Juan M, Hufford, Matthew B, Flint-Garcia, Sherry, Sawers, Ruairidh, Rellán-Álvarez, Rubén, Ross-Ibarra, Jeffrey, Runcie, Daniel E
Publicado 2022

Conserved noncoding sequences provide insights into regulatory sequence and loss of gene expression in maize

por Song, Baoxing, Buckler, Edward S., Wang, Hai, Wu, Yaoyao, Rees, Evan, Kellogg, Elizabeth A., Gates, Daniel J., Khaipho-Burch, Merritt, Bradbury, Peter J., Ross-Ibarra, Jeffrey, Hufford, Matthew B., Romay, M. Cinta
Publicado 2021