Metabolic reconstruction identifies strain-specific regulation of virulence in Toxoplasma gondii

por Song, Carl, Chiasson, Melissa A, Nursimulu, Nirvana, Hung, Stacy S, Wasmuth, James, Grigg, Michael E, Parkinson, John
Publicado 2013

Sequencing and annotation of the Ophiostoma ulmi genome

por Khoshraftar, Shima, Hung, Stacy, Khan, Sadia, Gong, Yunchen, Tyagi, Vibha, Parkinson, John, Sain, Mohini, Moses, Alan M, Christendat, Dinesh
Publicado 2013

Generation and Analysis of a Mouse Intestinal Metatranscriptome through Illumina Based RNA-Sequencing

por Xiong, Xuejian, Frank, Daniel N., Robertson, Charles E., Hung, Stacy S., Markle, Janet, Canty, Angelo J., McCoy, Kathy D., Macpherson, Andrew J., Poussier, Philippe, Danska, Jayne S., Parkinson, John
Publicado 2012

Activation-induced cytidine deaminase localizes to G-quadruplex motifs at mutation hotspots in lymphoma

por Xu, Ying-Zhi, Jenjaroenpun, Piroon, Wongsurawat, Thidathip, Byrum, Stephanie D, Shponka, Volodymyr, Tannahill, David, Chavez, Elizabeth A, Hung, Stacy S, Steidl, Christian, Balasubramanian, Shankar, Rimsza, Lisa M, Kendrick, Samantha
Publicado 2020

Combined Use of Gene Expression Modeling and siRNA Screening Identifies Genes and Pathways Which Enhance the Activity of Cisplatin When Added at No Effect Levels to Non-Small Cell...

por Leung, Ada W. Y., Hung, Stacy S., Backstrom, Ian, Ricaurte, Daniel, Kwok, Brian, Poon, Steven, McKinney, Steven, Segovia, Romulo, Rawji, Jenna, Qadir, Mohammed A., Aparicio, Samuel, Stirling, Peter C., Steidl, Christian, Bally, Marcel B.
Publicado 2016

Systems-Based Analysis of the Sarcocystis neurona Genome Identifies Pathways That Contribute to a Heteroxenous Life Cycle

por Blazejewski, Tomasz, Nursimulu, Nirvana, Pszenny, Viviana, Dangoudoubiyam, Sriveny, Namasivayam, Sivaranjani, Chiasson, Melissa A., Chessman, Kyle, Tonkin, Michelle, Swapna, Lakshmipuram S., Hung, Stacy S., Bridgers, Joshua, Ricklefs, Stacy M., Boulanger, Martin J., Dubey, Jitender P., Porcella, Stephen F., Kissinger, Jessica C., Howe, Daniel K., Grigg, Michael E., Parkinson, John
Publicado 2015

Synthetic modeling reveals HOXB genes are critical for the initiation and maintenance of human leukemia

por Kusakabe, Manabu, Sun, Ann Chong, Tyshchenko, Kateryna, Wong, Rachel, Nanda, Aastha, Shanna, Claire, Gusscott, Samuel, Chavez, Elizabeth A., Lorzadeh, Alireza, Zhu, Alice, Hill, Ainsleigh, Hung, Stacy, Brown, Scott, Babaian, Artem, Wang, Xuehai, Holt, Robert A., Steidl, Christian, Karsan, Aly, Humphries, R. Keith, Eaves, Connie J., Hirst, Martin, Weng, Andrew P.
Publicado 2019

Brentuximab vedotin in combination with rituximab, cyclophosphamide, doxorubicin, and prednisone as frontline treatment for patients with CD30-positive B-cell lymphomas

por Svoboda, Jakub, Bair, Steven M., Landsburg, Daniel J., Nasta, Sunita Dwivedy, Nagle, Sarah J., Barta, Stefan K., Khan, Nadia, Filicko-O'Hara, Joanne, Gaballa, Sameh, Strelec, Lauren, Chong, Elise, Mitnick, Sheryl, Waite, Terease S., King, Cara, Ballard, Hatcher, Youngman, Matthew, Gerson, James, Plastaras, John P., Maity, Amit, Bogusz, Agata M., Hung, Stacy S., Nakamura, Hisae, Nejati, Reza, Steidl, Christian, Lim, Megan, Ruella, Marco, Schuster, Stephen J.
Publicado 2020

Single-cell profiling reveals a memory B cell-like subtype of follicular lymphoma with increased transformation risk

por Wang, Xuehai, Nissen, Michael, Gracias, Deanne, Kusakabe, Manabu, Simkin, Guillermo, Jiang, Aixiang, Duns, Gerben, Sarkozy, Clementine, Hilton, Laura, Chavez, Elizabeth A., Segat, Gabriela C., Wong, Rachel, Kim, Jubin, Aoki, Tomohiro, Islam, Rashedul, May, Christina, Hung, Stacy, Tyshchenko, Kate, Brinkman, Ryan R., Hirst, Martin, Karsan, Aly, Freeman, Ciara, Sehn, Laurie H., Morin, Ryan D., Roth, Andrew J., Savage, Kerry J., Craig, Jeffrey W., Shah, Sohrab P., Steidl, Christian, Scott, David W., Weng, Andrew P.
Publicado 2022

Genomic analysis of the causative agents of coccidiosis in domestic chickens

por Reid, Adam J., Blake, Damer P., Ansari, Hifzur R., Billington, Karen, Browne, Hilary P., Bryant, Josephine, Dunn, Matt, Hung, Stacy S., Kawahara, Fumiya, Miranda-Saavedra, Diego, Malas, Tareq B., Mourier, Tobias, Naghra, Hardeep, Nair, Mridul, Otto, Thomas D., Rawlings, Neil D., Rivailler, Pierre, Sanchez-Flores, Alejandro, Sanders, Mandy, Subramaniam, Chandra, Tay, Yea-Ling, Woo, Yong, Wu, Xikun, Barrell, Bart, Dear, Paul H., Doerig, Christian, Gruber, Arthur, Ivens, Alasdair C., Parkinson, John, Rajandream, Marie-Adèle, Shirley, Martin W., Wan, Kiew-Lian, Berriman, Matthew, Tomley, Fiona M., Pain, Arnab
Publicado 2014

Tumor-associated antigen PRAME exhibits dualistic functions that are targetable in diffuse large B cell lymphoma

por Takata, Katsuyoshi, Chong, Lauren C., Ennishi, Daisuke, Aoki, Tomohiro, Li, Michael Yu, Thakur, Avinash, Healy, Shannon, Viganò, Elena, Dao, Tao, Kwon, Daniel, Duns, Gerben, Nielsen, Julie S., Ben-Neriah, Susana, Tse, Ethan, Hung, Stacy S., Boyle, Merrill, Mun, Sung Soo, Bourne, Christopher M., Woolcock, Bruce, Telenius, Adèle, Kishida, Makoto, Rai, Shinya, Zhang, Allen W., Bashashati, Ali, Saberi, Saeed, D’Antonio, Gianluca, Nelson, Brad H., Shah, Sohrab P., Hoodless, Pamela A., Melnick, Ari M., Gascoyne, Randy D., Connors, Joseph M., Scheinberg, David A., Béguelin, Wendy, Scott, David W., Steidl, Christian
Publicado 2022

The genomes of four tapeworm species reveal adaptations to parasitism

por Tsai, Isheng J., Zarowiecki, Magdalena, Holroyd, Nancy, Garciarrubio, Alejandro, Sánchez-Flores, Alejandro, Brooks, Karen L., Tracey, Alan, Bobes, Raúl J., Fragoso, Gladis, Sciutto, Edda, Aslett, Martin, Beasley, Helen, Bennett, Hayley M., Cai, Xuepeng, Camicia, Federico, Clark, Richard, Cucher, Marcela, De Silva, Nishadi, Day, Tim A, Deplazes, Peter, Estrada, Karel, Fernández, Cecilia, Holland, Peter W. H., Hou, Junling, Hu, Songnian, Huckvale, Thomas, Hung, Stacy S., Kamenetzky, Laura, Keane, Jacqueline A., Kiss, Ferenc, Koziol, Uriel, Lambert, Olivia, Liu, Kan, Luo, Xuenong, Luo, Yingfeng, Macchiaroli, Natalia, Nichol, Sarah, Paps, Jordi, Parkinson, John, Pouchkina-Stantcheva, Natasha, Riddiford, Nick, Rosenzvit, Mara, Salinas, Gustavo, Wasmuth, James D., Zamanian, Mostafa, Zheng, Yadong, Cai, Jianping, Soberón, Xavier, Olson, Peter D., Laclette, Juan P., Brehm, Klaus, Berriman, Matthew
Publicado 2013