Large-scale contamination of microbial isolate genomes by Illumina PhiX control

por Mukherjee, Supratim, Huntemann, Marcel, Ivanova, Natalia, Kyrpides, Nikos C, Pati, Amrita
Publicado 2015

Genome Analysis of a Verrucomicrobial Endosymbiont With a Tiny Genome Discovered in an Antarctic Lake

por Williams, Timothy J., Allen, Michelle A., Ivanova, Natalia, Huntemann, Marcel, Haque, Sabrina, Hancock, Alyce M., Brazendale, Sarah, Cavicchioli, Ricardo
Publicado 2021

Draft Genome Sequences of Three Strains of a Novel Rhizobiales Species Isolated from Forest Soil

por Pold, Grace, Huntemann, Marcel, Pillay, Manoj, Mikhailova, Natalia, Stamatis, Dimitrios, Reddy, T. B. K., Daum, Chris, Shapiro, Nicole, Kyrpides, Nikos, Woyke, Tanja, DeAngelis, Kristen M.
Publicado 2018

Genome sequence of the Wenxinia marina type strain (DSM 24838(T)), a representative of the Roseobacter group isolated from oilfield sediments

por Riedel, Thomas, Fiebig, Anne, Han, James, Huntemann, Marcel, Spring, Stefan, Petersen, Jörn, Ivanova, Natalia N., Markowitz, Victor, Woyke, Tanja, Göker, Markus, Kyrpides, Nikos C., Klenk, Hans-Peter
Publicado 2014

High quality draft genome sequence of Corynebacterium ulceribovis type strain IMMIB-L1395(T) (DSM 45146(T))

por Yassin, Atteyet F., Lapidus, Alla, Han, James, Reddy, T.B.K., Huntemann, Marcel, Pati, Amrita, Ivanova, Natalia, Markowitz, Victor, Woyke, Tanja, Klenk, Hans-Peter, Kyrpides, Nikos C.
Publicado 2015

Genome-Based Taxonomic Classification of Bacteroidetes

por Hahnke, Richard L., Meier-Kolthoff, Jan P., García-López, Marina, Mukherjee, Supratim, Huntemann, Marcel, Ivanova, Natalia N., Woyke, Tanja, Kyrpides, Nikos C., Klenk, Hans-Peter, Göker, Markus
Publicado 2016

Corrigendum: Genome-Based Taxonomic Classification of Bacteroidetes

por Hahnke, Richard L., Meier-Kolthoff, Jan P., García-López, Marina, Mukherjee, Supratim, Huntemann, Marcel, Ivanova, Natalia N., Woyke, Tanja, Kyrpides, Nikos C., Klenk, Hans-Peter, Göker, Markus
Publicado 2018

Plant microbiomes harbor potential to promote nutrient turnover in impoverished substrates of a Brazilian biodiversity hotspot

por Camargo, Antonio P., de Souza, Rafael S. C., Jose, Juliana, Gerhardt, Isabel R., Dante, Ricardo A., Mukherjee, Supratim, Huntemann, Marcel, Kyrpides, Nikos C., Carazzolle, Marcelo F., Arruda, Paulo
Publicado 2022

Genome sequence of Burkholderia mimosarum strain LMG 23256(T), a Mimosa pigra microsymbiont from Anso, Taiwan

por Willems, Anne, Tian, Rui, Bräu, Lambert, Goodwin, Lynne, Han, James, Liolios, Konstantinos, Huntemann, Marcel, Pati, Amrita, Woyke, Tanja, Mavrommatis, Konstantinos, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Reeve, Wayne
Publicado 2013

Genome Sequence of Verrucomicrobium sp. Strain GAS474, a Novel Bacterium Isolated from Soil

por Pold, Grace, Conlon, Erin M., Huntemann, Marcel, Pillay, Manoj, Mikhailova, Natalia, Stamatis, Dimitrios, Reddy, T. B. K., Daum, Chris, Shapiro, Nicole, Kyrpides, Nikos, Woyke, Tanja, DeAngelis, Kristen M.
Publicado 2018

Complete Genome Sequence of the Opitutaceae Bacterium Strain TAV5, a Potential Facultative Methylotroph of the Wood-Feeding Termite Reticulitermes flavipes

por Kotak, Malini, Isanapong, Jantiya, Goodwin, Lynne, Bruce, David, Chen, Amy, Han, Cliff S., Huntemann, Marcel, Ivanova, Natalia, Land, Miriam L., Nolan, Matt, Pati, Amrita, Woyke, Tanja, Rodrigues, Jorge L. M.
Publicado 2015

High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775(T), a plant pathogen of French bean pods

por Aizenberg-Gershtein, Yana, Izhaki, Ido, Lapidus, Alla, Copeland, Alex, Reddy, TBK, Huntemann, Marcel, Pillay, Manoj, Markowitz, Victor, Göker, Markus, Woyke, Tanja, Klenk, Hans-Peter, Kyrpides, Nikos C., Halpern, Malka
Publicado 2016

An improved high-quality draft genome sequence of Carnobacterium inhibens subsp. inhibens strain K1(T)

por Nicholson, Wayne L., Davis, Christina L., Shapiro, Nicole, Huntemann, Marcel, Clum, Alicia, Reddy, T. B. K., Pillay, Manoj, Markowitz, Victor, Varghese, Neha, Pati, Amrita, Ivanova, Natalia, Kyrpides, Nikos, Woyke, Tanja
Publicado 2016

High quality draft genome sequence of Leucobacter chironomi strain MM2LB(T) (DSM 19883(T)) isolated from a Chironomus sp. egg mass

por Laviad, Sivan, Lapidus, Alla, Copeland, Alex, Reddy, TBK, Huntemann, Marcel, Pati, Amrita, Ivanova, Natalia N, Markowitz, Victor M, Pukall, Rüdiger, Klenk, Hans-Peter, Woyke, Tanja, Kyrpides, Nikos C, Halpern, Malka
Publicado 2015

Discovery of a novel filamentous prophage in the genome of the Mimosa pudica microsymbiont Cupriavidus taiwanensis STM 6018

por Klonowska, Agnieszka, Ardley, Julie, Moulin, Lionel, Zandberg, Jaco, Patrel, Delphine, Gollagher, Margaret, Marinova, Dora, Reddy, T. B. K., Varghese, Neha, Huntemann, Marcel, Woyke, Tanja, Seshadri, Rekha, Ivanova, Natalia, Kyrpides, Nikos, Reeve, Wayne
Publicado 2023

IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project

por Markowitz, Victor M., Chen, I-Min A., Chu, Ken, Szeto, Ernest, Palaniappan, Krishna, Jacob, Biju, Ratner, Anna, Liolios, Konstantinos, Pagani, Ioanna, Huntemann, Marcel, Mavromatis, Konstantinos, Ivanova, Natalia N., Kyrpides, Nikos C.
Publicado 2012

Patterns in Wetland Microbial Community Composition and Functional Gene Repertoire Associated with Methane Emissions

por He, Shaomei, Malfatti, Stephanie A., McFarland, Jack W., Anderson, Frank E., Pati, Amrita, Huntemann, Marcel, Tremblay, Julien, Glavina del Rio, Tijana, Waldrop, Mark P., Windham-Myers, Lisamarie, Tringe, Susannah G.
Publicado 2015

Genome sequence of the pink–pigmented marine bacterium Loktanella hongkongensis type strain (UST950701–009P(T)), a representative of the Roseobacter group

por Lau, Stanley CK, Riedel, Thomas, Fiebig, Anne, Han, James, Huntemann, Marcel, Petersen, Jörn, Ivanova, Natalia N., Markowitz, Victor, Woyke, Tanja, Göker, Markus, Kyrpides, Nikos C., Klenk, Hans-Peter, Qian, Pei-Yuan
Publicado 2015

Permanent draft genome of Thiobacillus thioparus DSM 505(T), an obligately chemolithoautotrophic member of the Betaproteobacteria

por Hutt, Lee P., Huntemann, Marcel, Clum, Alicia, Pillay, Manoj, Palaniappan, Krishnaveni, Varghese, Neha, Mikhailova, Natalia, Stamatis, Dimitrios, Reddy, Tatiparthi, Daum, Chris, Shapiro, Nicole, Ivanova, Natalia, Kyrpides, Nikos, Woyke, Tanja, Boden, Rich
Publicado 2017

Genome sequence of Ensifer meliloti strain WSM1022; a highly effective microsymbiont of the model legume Medicago truncatula A17

por Terpolilli, Jason, Hill, Yvette, Tian, Rui, Howieson, John, Bräu, Lambert, Goodwin, Lynne, Han, James, Liolios, Konstantinos, Huntemann, Marcel, Pati, Amrita, Woyke, Tanja, Mavromatis, Konstantinos, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Reeve, Wayne
Publicado 2013