BIOME-Preserve: A novel storage and transport medium for preserving anaerobic microbiota samples for culture recovery

por Hyde, Embriette R., Lozano, Hiram, Cox, Steven
Publicado 2022

Ribosomal RNA, the lens into life

por McDonald, Daniel, Xu, Zhenjiang, Hyde, Embriette R., Knight, Rob
Publicado 2015

The Living Dead: Bacterial Community Structure of a Cadaver at the Onset and End of the Bloat Stage of Decomposition

por Hyde, Embriette R., Haarmann, Daniel P., Lynne, Aaron M., Bucheli, Sibyl R., Petrosino, Joseph F.
Publicado 2013

Tracking down the sources of experimental contamination in microbiome studies

por Weiss, Sophie, Amir, Amnon, Hyde, Embriette R, Metcalf, Jessica L, Song, Se Jin, Knight, Rob
Publicado 2014

Microbiome disruption and recovery in the fish Gambusia affinis following exposure to broad-spectrum antibiotic

por Carlson, Jeanette M, Leonard, Annie B, Hyde, Embriette R, Petrosino, Joseph F, Primm, Todd P
Publicado 2017

Metagenomic Analysis of Nitrate-Reducing Bacteria in the Oral Cavity: Implications for Nitric Oxide Homeostasis

por Hyde, Embriette R., Andrade, Fernando, Vaksman, Zalman, Parthasarathy, Kavitha, Jiang, Hong, Parthasarathy, Deepa K., Torregrossa, Ashley C., Tribble, Gena, Kaplan, Heidi B., Petrosino, Joseph F., Bryan, Nathan S.
Publicado 2014

Normalization and microbial differential abundance strategies depend upon data characteristics

por Weiss, Sophie, Xu, Zhenjiang Zech, Peddada, Shyamal, Amir, Amnon, Bittinger, Kyle, Gonzalez, Antonio, Lozupone, Catherine, Zaneveld, Jesse R., Vázquez-Baeza, Yoshiki, Birmingham, Amanda, Hyde, Embriette R., Knight, Rob
Publicado 2017

Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns

por Amir, Amnon, McDonald, Daniel, Navas-Molina, Jose A., Kopylova, Evguenia, Morton, James T., Zech Xu, Zhenjiang, Kightley, Eric P., Thompson, Luke R., Hyde, Embriette R., Gonzalez, Antonio, Knight, Rob
Publicado 2017

Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys

por Walters, William, Hyde, Embriette R., Berg-Lyons, Donna, Ackermann, Gail, Humphrey, Greg, Parada, Alma, Gilbert, Jack A., Jansson, Janet K., Caporaso, J. Gregory, Fuhrman, Jed A., Apprill, Amy, Knight, Rob
Publicado 2015

The Oral and Skin Microbiomes of Captive Komodo Dragons Are Significantly Shared with Their Habitat

por Hyde, Embriette R., Navas-Molina, Jose A., Song, Se Jin, Kueneman, Jordan G., Ackermann, Gail, Cardona, Cesar, Humphrey, Gregory, Boyer, Don, Weaver, Tom, Mendelson, Joseph R., McKenzie, Valerie J., Gilbert, Jack A., Knight, Rob
Publicado 2016

Balance Trees Reveal Microbial Niche Differentiation

por Morton, James T., Sanders, Jon, Quinn, Robert A., McDonald, Daniel, Gonzalez, Antonio, Vázquez-Baeza, Yoshiki, Navas-Molina, Jose A., Song, Se Jin, Metcalf, Jessica L., Hyde, Embriette R., Lladser, Manuel, Dorrestein, Pieter C., Knight, Rob
Publicado 2017

Frequency of Tongue Cleaning Impacts the Human Tongue Microbiome Composition and Enterosalivary Circulation of Nitrate

por Tribble, Gena D., Angelov, Nikola, Weltman, Robin, Wang, Bing-Yan, Eswaran, Sridhar V., Gay, Isabel C., Parthasarathy, Kavitha, Dao, Doan-Hieu V., Richardson, Katherine N., Ismail, Nadia M., Sharina, Iraida G., Hyde, Embriette R., Ajami, Nadim J., Petrosino, Joseph F., Bryan, Nathan S.
Publicado 2019

From Sample to Multi-Omics Conclusions in under 48 Hours

por Quinn, Robert A., Navas-Molina, Jose A., Hyde, Embriette R., Song, Se Jin, Vázquez-Baeza, Yoshiki, Humphrey, Greg, Gaffney, James, Minich, Jeremiah J., Melnik, Alexey V., Herschend, Jakob, DeReus, Jeff, Durant, Austin, Dutton, Rachel J., Khosroheidari, Mahdieh, Green, Clifford, da Silva, Ricardo, Dorrestein, Pieter C., Knight, Rob
Publicado 2016