Different types of secondary information in the genetic code

por Maraia, Richard J., Iben, James R.
Publicado 2014

Single molecule poly(A) tail-seq shows LARP4 opposes deadenylation throughout mRNA lifespan with most impact on short tails

por Mattijssen, Sandy, Iben, James R, Li, Tianwei, Coon, Steven L, Maraia, Richard J
Publicado 2020

Global ‘bootprinting’ reveals the elastic architecture of the yeast TFIIIB–TFIIIC transcription complex in vivo

por Nagarajavel, V., Iben, James R., Howard, Bruce H., Maraia, Richard J., Clark, David J.
Publicado 2013

RSC-dependent constructive and destructive interference between opposing arrays of phased nucleosomes in yeast

por Ganguli, Dwaipayan, Chereji, Răzvan V., Iben, James R., Cole, Hope A., Clark, David J.
Publicado 2014

Heavy transcription of yeast genes correlates with differential loss of histone H2B relative to H4 and queued RNA polymerases

por Cole, Hope A., Ocampo, Josefina, Iben, James R., Chereji, Răzvan V., Clark, David J.
Publicado 2014

The leucine-NH4(+) uptake regulator Any1 limits growth as part of a general amino acid control response to loss of La protein by fission yeast

por Cherkasova, Vera, Iben, James R., Pridham, Kevin J., Kessler, Alan C., Maraia, Richard J.
Publicado 2021

LARP4 mRNA codon-tRNA match contributes to LARP4 activity for ribosomal protein mRNA poly(A) tail length protection

por Mattijssen, Sandy, Arimbasseri, Aneeshkumar G, Iben, James R, Gaidamakov, Sergei, Lee, Joowon, Hafner, Markus, Maraia, Richard J
Publicado 2017

Overexpression of the Bacteriophage T4 motB Gene Alters H-NS Dependent Repression of Specific Host DNA

por Patterson-West, Jennifer, Tai, Chin-Hsien, Son, Bokyung, Hsieh, Meng-Lun, Iben, James R., Hinton, Deborah M.
Publicado 2021

Point mutations in the Rpb9-homologous domain of Rpc11 that impair transcription termination by RNA polymerase III

por Iben, James R., Mazeika, Julie K., Hasson, Sam, Rijal, Keshab, Arimbasseri, Aneeshkumar G., Russo, Amy N., Maraia, Richard J.
Publicado 2011

RNA Polymerase III Output Is Functionally Linked to tRNA Dimethyl-G26 Modification

por Arimbasseri, Aneeshkumar G., Blewett, Nathan H., Iben, James R., Lamichhane, Tek N., Cherkasova, Vera, Hafner, Markus, Maraia, Richard J.
Publicado 2015

Lack of tRNA-i6A modification causes mitochondrial-like metabolic deficiency in S. pombe by limiting activity of cytosolic tRNA(Tyr), not mito-tRNA

por Lamichhane, Tek N., Arimbasseri, Aneeshkumar G., Rijal, Keshab, Iben, James R., Wei, Fan Yan, Tomizawa, Kazuhito, Maraia, Richard J.
Publicado 2016

The E. coli Global Regulator DksA Reduces Transcription during T4 Infection

por Patterson-West, Jennifer, James, Tamara D., Fernández-Coll, Llorenç, Iben, James R., Moon, Kyung, Knipling, Leslie, Cashel, Michael, Hinton, Deborah M.
Publicado 2018

Differential aging of growth plate cartilage underlies differences in bone length and thus helps determine skeletal proportions

por Lui, Julian C., Jee, Youn Hee, Garrison, Presley, Iben, James R., Yue, Shanna, Ad, Michal, Nguyen, Quang, Kikani, Bijal, Wakabayashi, Yoshiyuki, Baron, Jeffrey
Publicado 2018

Cell Type- and Sex-Dependent Transcriptome Profiles of Rat Anterior Pituitary Cells

por Fletcher, Patrick A., Smiljanic, Kosara, Maso Prévide, Rafael, Iben, James R., Li, Tianwei, Rokic, Milos B., Sherman, Arthur, Coon, Steven L., Stojilkovic, Stanko S.
Publicado 2019

Identification of Novel Pathways Associated with Patterned Cerebellar Purkinje Neuron Degeneration in Niemann-Pick Disease, Type C1

por Martin, Kyle B., Williams, Ian M., Cluzeau, Celine V., Cougnoux, Antony, Dale, Ryan K., Iben, James R., Cawley, Niamh X., Wassif, Christopher A., Porter, Forbes D.
Publicado 2019

Morphologic and Molecular Characterization of Adrenals and Adrenal Rest Affected by Congenital Adrenal Hyperplasia

por Kolli, Vipula, da Cunha, Isabela Werneck, Kim, SunA, Iben, James R., Mallappa, Ashwini, Li, Tianwei, Gaynor, Alison, Coon, Steven L., Quezado, Martha M., Merke, Deborah P.
Publicado 2021

Structural basis of 3′-end poly(A) RNA recognition by LARP1

por Kozlov, Guennadi, Mattijssen, Sandy, Jiang, Jianning, Nyandwi, Samuel, Sprules, Tara, Iben, James R, Coon, Steven L, Gaidamakov, Sergei, Noronha, Anne M, Wilds, Christopher J, Maraia, Richard J, Gehring, Kalle
Publicado 2022

Comparative whole genome sequencing reveals phenotypic tRNA gene duplication in spontaneous Schizosaccharomyces pombe La mutants

por Iben, James R., Epstein, Jonathan A., Bayfield, Mark A., Bruinsma, Monique W., Hasson, Samuel, Bacikova, Dagmar, Ahmad, Daniel, Rockwell, Denise, Kittler, Ellen L. W., Zapp, Maria L., Maraia, Richard J.
Publicado 2011

LEDGF/p75 interacts with mRNA splicing factors and targets HIV-1 integration to highly spliced genes

por Singh, Parmit Kumar, Plumb, Matthew R., Ferris, Andrea L., Iben, James R., Wu, Xiaolin, Fadel, Hind J., Luke, Brian T., Esnault, Caroline, Poeschla, Eric M., Hughes, Stephen H., Kvaratskhelia, Mamuka, Levin, Henry L.
Publicado 2015

Epigenetic regulation of hematopoiesis by DNA methylation

por Gore, Aniket V, Athans, Brett, Iben, James R, Johnson, Kristin, Russanova, Valya, Castranova, Daniel, Pham, Van N, Butler, Matthew G, Williams-Simons, Lisa, Nichols, James T, Bresciani, Erica, Feldman, Bejamin, Kimmel, Charles B, Liu, Paul P, Weinstein, Brant M
Publicado 2016