GUANinE v0.9: Benchmark Datasets for Genomic AI Sequence-to-Function Models

por robson, eyes s., Ioannidis, Nilah M.
Publicado 2023

The Impact of Stability Considerations on Genetic Fine-Mapping

por Aw, Alan, Jin, Lionel Chentian, Ioannidis, Nilah, Song, Yun S.
Publicado 2023

Cross-protein transfer learning substantially improves disease variant prediction

por Jagota, Milind, Ye, Chengzhong, Albors, Carlos, Rastogi, Ruchir, Koehl, Antoine, Ioannidis, Nilah, Song, Yun S.
Publicado 2023

Tissue-specific impacts of aging and genetics on gene expression patterns in humans

por Yamamoto, Ryo, Chung, Ryan, Vazquez, Juan Manuel, Sheng, Huanjie, Steinberg, Philippa L., Ioannidis, Nilah M., Sudmant, Peter H.
Publicado 2022

Gene expression imputation identifies candidate genes and susceptibility loci associated with cutaneous squamous cell carcinoma

por Ioannidis, Nilah M., Wang, Wei, Furlotte, Nicholas A., Hinds, David A., Bustamante, Carlos D., Jorgenson, Eric, Asgari, Maryam M., Whittemore, Alice S.
Publicado 2018

Pretraining strategies for effective promoter-driven gene expression prediction

por Reddy, Aniketh Janardhan, Herschl, Michael H., Kolli, Sathvik, Lu, Amy X., Geng, Xinyang, Kumar, Aviral, Hsu, Patrick D., Levine, Sergey, Ioannidis, Nilah M.
Publicado 2023