A statistical method to identify recombination in bacterial genomes based on SNP incompatibility

por Lai, Yi-Pin, Ioerger, Thomas R.
Publicado 2018

Exploiting Homoplasy in Genome-Wide Association Studies to Enhance Identification of Antibiotic-Resistance Mutations in Bacterial Genomes

por Lai, Yi-Pin, Ioerger, Thomas R
Publicado 2020

A Hidden Markov Model for identifying essential and growth-defect regions in bacterial genomes from transposon insertion sequencing data

por DeJesus, Michael A, Ioerger, Thomas R
Publicado 2013

A mutant fitness assay identifies bacterial interactions in a model ocean hot spot

por Schreier, Jeremy E., Smith, Christa B., Ioerger, Thomas R., Moran, Mary Ann
Publicado 2023

Mycobacterium smegmatis HtrA Blocks the Toxic Activity of a Putative Cell Wall Amidase

por Wu, Katherine J., Boutte, Cara C., Ioerger, Thomas R., Rubin, Eric J.
Publicado 2019

TRANSIT - A Software Tool for Himar1 TnSeq Analysis

por DeJesus, Michael A., Ambadipudi, Chaitra, Baker, Richard, Sassetti, Christopher, Ioerger, Thomas R.
Publicado 2015

Altered Mycobacterium tuberculosis Cell Wall Metabolism and Physiology Associated With RpoB Mutation H526D

por Campodónico, Victoria L., Rifat, Dalin, Chuang, Yu-Min, Ioerger, Thomas R., Karakousis, Petros C.
Publicado 2018

A dose-response based model for statistical analysis of chemical genetic interactions in CRISPRi libraries

por Choudhery, Sanjeevani, DeJesus, Michael A., Srinivasan, Aarthi, Rock, Jeremy, Schnappinger, Dirk, Ioerger, Thomas R.
Publicado 2023

Comprehensive analysis of iron utilization by Mycobacterium tuberculosis

por Zhang, Lei, Hendrickson, R. Curtis, Meikle, Virginia, Lefkowitz, Elliot J., Ioerger, Thomas R., Niederweis, Michael
Publicado 2020

Deletion of Rv2571c Confers Resistance to Arylamide Compounds in Mycobacterium tuberculosis

por Shelton, Catherine D., McNeil, Matthew B., Early, Julie V., Ioerger, Thomas R., Parish, Tanya
Publicado 2021

Modeling Site-Specific Nucleotide Biases Affecting Himar1 Transposon Insertion Frequencies in TnSeq Data Sets

por Choudhery, Sanjeevani, Brown, A. Jacob, Akusobi, Chidiebere, Rubin, Eric J., Sassetti, Christopher M., Ioerger, Thomas R.
Publicado 2021

Perturbation of Cytochrome c Maturation Reveals Adaptability of the Respiratory Chain in Mycobacterium tuberculosis

por Small, Jennifer L., Park, Sae Woong, Kana, Bavesh D., Ioerger, Thomas R., Sacchettini, James C., Ehrt, Sabine
Publicado 2013

Statistical analysis of genetic interactions in Tn-Seq data

por DeJesus, Michael A., Nambi, Subhalaxmi, Smith, Clare M., Baker, Richard E., Sassetti, Christopher M., Ioerger, Thomas R.
Publicado 2017

Distinct Bacterial Pathways Influence the Efficacy of Antibiotics against Mycobacterium tuberculosis

por Bellerose, Michelle M., Proulx, Megan K., Smith, Clare M., Baker, Richard E., Ioerger, Thomas R., Sassetti, Christopher M.
Publicado 2020

Mutations in the anti-sigma H factor RshA confer resistance to econazole and clotrimazole in Mycobacterium smegmatis

por Morbidoni, Héctor R., de la Iglesia, Agustina I., Figueroa, Virginia, Di Capua, Cecilia, Ioerger, Thomas R., Parish, Tanya
Publicado 2019

High-Resolution Phenotypic Profiling Defines Genes Essential for Mycobacterial Growth and Cholesterol Catabolism

por Griffin, Jennifer E., Gawronski, Jeffrey D., DeJesus, Michael A., Ioerger, Thomas R., Akerley, Brian J., Sassetti, Christopher M.
Publicado 2011

A vitamin B(12) transporter in Mycobacterium tuberculosis

por Gopinath, Krishnamoorthy, Venclovas, Česlovas, Ioerger, Thomas R., Sacchettini, James C., McKinney, John D., Mizrahi, Valerie, Warner, Digby F.
Publicado 2013

Genetic models of latent tuberculosis in mice reveal differential influence of adaptive immunity

por Su, Hongwei, Lin, Kan, Tiwari, Divya, Healy, Claire, Trujillo, Carolina, Liu, Yao, Ioerger, Thomas R., Schnappinger, Dirk, Ehrt, Sabine
Publicado 2021

Synthesis and Structure–Activity Relationships of a New Class of Oxadiazoles Targeting DprE1 as Antitubercular Agents

por Yadav, Veena D., Boshoff, Helena I., Trifonov, Lena, Roma, Jose Santinni O., Ioerger, Thomas R., Barry, Clifton E., Oh, Sangmi
Publicado 2023

Global Assessment of Genomic Regions Required for Growth in Mycobacterium tuberculosis

por Zhang, Yanjia J., Ioerger, Thomas R., Huttenhower, Curtis, Long, Jarukit E., Sassetti, Christopher M., Sacchettini, James C., Rubin, Eric J.
Publicado 2012