Assessment of k-mer spectrum applicability for metagenomic dissimilarity analysis

por Dubinkina, Veronika B., Ischenko, Dmitry S., Ulyantsev, Vladimir I., Tyakht, Alexander V., Alexeev, Dmitry G.
Publicado 2016

Evolutionary pathway analysis and unified classification of East Asian lineage of Mycobacterium tuberculosis

por Shitikov, Egor, Kolchenko, Sergey, Mokrousov, Igor, Bespyatykh, Julia, Ischenko, Dmitry, Ilina, Elena, Govorun, Vadim
Publicado 2017

Agent Based Modeling of Human Gut Microbiome Interactions and Perturbations

por Shashkova, Tatiana, Popenko, Anna, Tyakht, Alexander, Peskov, Kirill, Kosinsky, Yuri, Bogolubsky, Lev, Raigorodskii, Andrei, Ischenko, Dmitry, Alexeev, Dmitry, Govorun, Vadim
Publicado 2016

Large scale analysis of amino acid substitutions in bacterial proteomics

por Ischenko, Dmitry, Alexeev, Dmitry, Shitikov, Egor, Kanygina, Alexandra, Malakhova, Maja, Kostryukova, Elena, Larin, Andrey, Kovalchuk, Sergey, Pobeguts, Olga, Butenko, Ivan, Anikanov, Nikolay, Altukhov, Ilya, Ilina, Elena, Govorun, Vadim
Publicado 2016

Characterization of secretomes provides evidence for adipose-derived mesenchymal stromal cells subtypes

por Kalinina, Natalia, Kharlampieva, Daria, Loguinova, Marina, Butenko, Ivan, Pobeguts, Olga, Efimenko, Anastasia, Ageeva, Luidmila, Sharonov, George, Ischenko, Dmitry, Alekseev, Dmitry, Grigorieva, Olga, Sysoeva, Veronika, Rubina, Ksenia, Lazarev, Vassiliy, Govorun, Vadim
Publicado 2015

RNA-Seq gene expression profiling of HepG2 cells: the influence of experimental factors and comparison with liver tissue

por Tyakht, Alexander V, Ilina, Elena N, Alexeev, Dmitry G, Ischenko, Dmitry S, Gorbachev, Alexey Y, Semashko, Tatiana A, Larin, Andrei K, Selezneva, Oksana V, Kostryukova, Elena S, Karalkin, Pavel A, Vakhrushev, Igor V, Kurbatov, Leonid K, Archakov, Alexander I, Govorun, Vadim M
Publicado 2014

Dissection of affinity captured LINE-1 macromolecular complexes

por Taylor, Martin S, Altukhov, Ilya, Molloy, Kelly R, Mita, Paolo, Jiang, Hua, Adney, Emily M, Wudzinska, Aleksandra, Badri, Sana, Ischenko, Dmitry, Eng, George, Burns, Kathleen H, Fenyö, David, Chait, Brian T, Alexeev, Dmitry, Rout, Michael P, Boeke, Jef D, LaCava, John
Publicado 2018

Unusual Large-Scale Chromosomal Rearrangements in Mycobacterium tuberculosis Beijing B0/W148 Cluster Isolates

por Shitikov, Egor A., Bespyatykh, Julia A., Ischenko, Dmitry S., Alexeev, Dmitry G., Karpova, Irina Y., Kostryukova, Elena S., Isaeva, Yulia D., Nosova, Elena Y., Mokrousov, Igor V., Vyazovaya, Anna A., Narvskaya, Olga V., Vishnevsky, Boris I., Otten, Tatiana F., Zhuravlev, Valery Y., Yablonsky, Peter K., Ilina, Elena N., Govorun, Vadim M.
Publicado 2014

Comparative Genomic Analysis of Mycobacterium tuberculosis Drug Resistant Strains from Russia

por Ilina, Elena N., Shitikov, Egor A., Ikryannikova, Larisa N., Alekseev, Dmitry G., Kamashev, Dmitri E., Malakhova, Maja V., Parfenova, Tatjana V., Afanas’ev, Maxim V., Ischenko, Dmitry S., Bazaleev, Nikolai A., Smirnova, Tatjana G., Larionova, Elena E., Chernousova, Larisa N., Beletsky, Alexey V., Mardanov, Andrei V., Ravin, Nikolai V., Skryabin, Konstantin G., Govorun, Vadim M.
Publicado 2013

Microbiome Responses to an Uncontrolled Short-Term Diet Intervention in the Frame of the Citizen Science Project

por Klimenko, Natalia S., Tyakht, Alexander V., Popenko, Anna S., Vasiliev, Anatoly S., Altukhov, Ilya A., Ischenko, Dmitry S., Shashkova, Tatiana I., Efimova, Daria A., Nikogosov, Dmitri A., Osipenko, Dmitrii A., Musienko, Sergey V., Selezneva, Kseniya S., Baranova, Ancha, Kurilshikov, Alexander M., Toshchakov, Stepan M., Korzhenkov, Aleksei A., Samarov, Nazar I., Shevchenko, Margarita A., Tepliuk, Alina V., Alexeev, Dmitry G.
Publicado 2018

Genome-wide Mycobacterium tuberculosis variation (GMTV) database: a new tool for integrating sequence variations and epidemiology

por Chernyaeva, Ekaterina N, Shulgina, Marina V, Rotkevich, Mikhail S, Dobrynin, Pavel V, Simonov, Serguei A, Shitikov, Egor A, Ischenko, Dmitry S, Karpova, Irina Y, Kostryukova, Elena S, Ilina, Elena N, Govorun, Vadim M, Zhuravlev, Vyacheslav Y, Manicheva, Olga A, Yablonsky, Peter K, Isaeva, Yulia D, Nosova, Elena Y, Mokrousov, Igor V, Vyazovaya, Anna A, Narvskaya, Olga V, Lapidus, Alla L, O’Brien, Stephen J
Publicado 2014

Data on gut metagenomes of the patients with alcoholic dependence syndrome and alcoholic liver cirrhosis

por Tyakht, Alexander V., Dubinkina, Veronika B., Odintsova, Vera Y., Yarygin, Konstantin S., Kovarsky, Boris A., Pavlenko, Alexander V., Ischenko, Dmitry S., Popenko, Anna S., Alexeev, Dmitry G., Taraskina, Anastasiya Y., Nasyrova, Regina F., Krupitski, Evgeny M., Shalikiani, Nino V., Bakulin, Igor G., Shcherbakov, Petr L., Skorodumova, Lyubov O., Larin, Andrei K., Kostryukova, Elena S., Abdulkhakov, Rustam A., Abdulkhakov, Sayar R., Malanin, Sergey Y., Ismagilova, Ruzilya K., Grigoryeva, Tatiana V., Ilina, Elena N., Govorun, Vadim M.
Publicado 2017

Links of gut microbiota composition with alcohol dependence syndrome and alcoholic liver disease

por Dubinkina, Veronika B., Tyakht, Alexander V., Odintsova, Vera Y., Yarygin, Konstantin S., Kovarsky, Boris A., Pavlenko, Alexander V., Ischenko, Dmitry S., Popenko, Anna S., Alexeev, Dmitry G., Taraskina, Anastasiya Y., Nasyrova, Regina F., Krupitsky, Evgeny M., Shalikiani, Nino V., Bakulin, Igor G., Shcherbakov, Petr L., Skorodumova, Lyubov O., Larin, Andrei K., Kostryukova, Elena S., Abdulkhakov, Rustam A., Abdulkhakov, Sayar R., Malanin, Sergey Y., Ismagilova, Ruzilya K., Grigoryeva, Tatiana V., Ilina, Elena N., Govorun, Vadim M.
Publicado 2017

Genetic diversity of Escherichia coli in gut microbiota of patients with Crohn’s disease discovered using metagenomic and genomic analyses

por Tyakht, Alexander V., Manolov, Alexander I., Kanygina, Alexandra V., Ischenko, Dmitry S., Kovarsky, Boris A., Popenko, Anna S., Pavlenko, Alexander V., Elizarova, Anna V., Rakitina, Daria V., Baikova, Julia P., Ladygina, Valentina G., Kostryukova, Elena S., Karpova, Irina Y., Semashko, Tatyana A., Larin, Andrei K., Grigoryeva, Tatyana V., Sinyagina, Mariya N., Malanin, Sergei Y., Shcherbakov, Petr L., Kharitonova, Anastasiya Y., Khalif, Igor L., Shapina, Marina V., Maev, Igor V., Andreev, Dmitriy N., Belousova, Elena A., Buzunova, Yulia M., Alexeev, Dmitry G., Govorun, Vadim M.
Publicado 2018