Helix encoder: a compound-protein interaction prediction model specifically designed for class A GPCRs

por Yamane, Haruki, Ishida, Takashi
Publicado 2023

PrDOS: prediction of disordered protein regions from amino acid sequence

por Ishida, Takashi, Kinoshita, Kengo
Publicado 2007

Protein model accuracy estimation based on local structure quality assessment using 3D convolutional neural network

por Sato, Rin, Ishida, Takashi
Publicado 2019

Sequence alignment generation using intermediate sequence search for homology modeling

por Makigaki, Shuichiro, Ishida, Takashi
Publicado 2020

P3CMQA: Single-Model Quality Assessment Using 3DCNN with Profile-Based Features

por Takei, Yuma, Ishida, Takashi
Publicado 2021

End-to-end learning for compound activity prediction based on binding pocket information

por Tanebe, Toshitaka, Ishida, Takashi
Publicado 2021

A Benchmark Dataset for Evaluating Practical Performance of Model Quality Assessment of Homology Models

por Takei, Yuma, Ishida, Takashi
Publicado 2022

Protein Model Quality Estimation Using Molecular Dynamics Simulation

por Kurniawan, Jason, Ishida, Takashi
Publicado 2022

PiSite: a database of protein interaction sites using multiple binding states in the PDB

por Higurashi, Miho, Ishida, Takashi, Kinoshita, Kengo
Publicado 2009

Acceleration of sequence clustering using longest common subsequence filtering

por Namiki, Youhei, Ishida, Takashi, Akiyama, Yutaka
Publicado 2013

Location, Location, Location: How Vascular Specialization Influences Hematopoietic Fates During Development

por Heck, Adam M., Ishida, Takashi, Hadland, Brandon
Publicado 2020

GHOSTM: A GPU-Accelerated Homology Search Tool for Metagenomics

por Suzuki, Shuji, Ishida, Takashi, Kurokawa, Ken, Akiyama, Yutaka
Publicado 2012

MMS21/HPY2 and SIZ1, Two Arabidopsis SUMO E3 Ligases, Have Distinct Functions in Development

por Ishida, Takashi, Yoshimura, Mika, Miura, Kenji, Sugimoto, Keiko
Publicado 2012

GHOSTX: An Improved Sequence Homology Search Algorithm Using a Query Suffix Array and a Database Suffix Array

por Suzuki, Shuji, Kakuta, Masanori, Ishida, Takashi, Akiyama, Yutaka
Publicado 2014

Faster sequence homology searches by clustering subsequences

por Suzuki, Shuji, Kakuta, Masanori, Ishida, Takashi, Akiyama, Yutaka
Publicado 2015

GPU-Acceleration of Sequence Homology Searches with Database Subsequence Clustering

por Suzuki, Shuji, Kakuta, Masanori, Ishida, Takashi, Akiyama, Yutaka
Publicado 2016

Targeting General Transcriptional Machinery as a Therapeutic Strategy for Adult T-Cell Leukemia

por Wong, Regina Wan Ju, Ishida, Takashi, Sanda, Takaomi
Publicado 2018

Effect of an aerosol box on tracheal intubation difficulty

por Wakabayashi, Ryo, Ishida, Takashi, Yamada, Tomokatsu, Kawamata, Mikito
Publicado 2020

Highly precise protein-protein interaction prediction based on consensus between template-based and de novo docking methods

por Ohue, Masahito, Matsuzaki, Yuri, Shimoda, Takehiro, Ishida, Takashi, Akiyama, Yutaka
Publicado 2013

Protein-protein docking on hardware accelerators: comparison of GPU and MIC architectures

por Shimoda, Takehiro, Suzuki, Shuji, Ohue, Masahito, Ishida, Takashi, Akiyama, Yutaka
Publicado 2015