Interpretation of the Consequences of Mutations in Protein Kinases: Combined Use of Bioinformatics and Text Mining

por Izarzugaza, Jose M. G., Krallinger, Martin, Valencia, Alfonso
Publicado 2012

Extraction of human kinase mutations from literature, databases and genotyping studies

por Krallinger, Martin, Izarzugaza, Jose MG, Rodriguez-Penagos, Carlos, Valencia, Alfonso
Publicado 2009

Prioritization of pathogenic mutations in the protein kinase superfamily

por Izarzugaza, Jose MG, del Pozo, Angela, Vazquez, Miguel, Valencia, Alfonso
Publicado 2012

wKinMut: An integrated tool for the analysis and interpretation of mutations in human protein kinases

por Izarzugaza, Jose MG, Vazquez, Miguel, del Pozo, Angela, Valencia, Alfonso
Publicado 2013

Human MHC-II with Shared Epitope Motifs Are Optimal Epstein-Barr Virus Glycoprotein 42 Ligands—Relation to Rheumatoid Arthritis

por Trier, Nicole, Izarzugaza, Jose, Chailyan, Anna, Marcatili, Paolo, Houen, Gunnar
Publicado 2018

Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental trios

por Matey-Hernandez, Maria Luisa, Brunak, Søren, Izarzugaza, Jose M. G.
Publicado 2018

Enhancing the prediction of protein pairings between interacting families using orthology information

por Izarzugaza, Jose MG, Juan, David, Pons, Carles, Pazos, Florencio, Valencia, Alfonso
Publicado 2008

Prediction of Disease Causing Non-Synonymous SNPs by the Artificial Neural Network Predictor NetDiseaseSNP

por Johansen, Morten Bo, Izarzugaza, Jose M. G., Brunak, Søren, Petersen, Thomas Nordahl, Gupta, Ramneek
Publicado 2013

KinMutRF: a random forest classifier of sequence variants in the human protein kinase superfamily

por Pons, Tirso, Vazquez, Miguel, Matey-Hernandez, María Luisa, Brunak, Søren, Valencia, Alfonso, Izarzugaza, Jose MG
Publicado 2016

TSEMA: interactive prediction of protein pairings between interacting families

por Izarzugaza, José M. G., Juan, David, Pons, Carles, Ranea, Juan A. G., Valencia, Alfonso, Pazos, Florencio
Publicado 2006

Characterization of pathogenic germline mutations in human Protein Kinases

por Izarzugaza, Jose MG, Hopcroft, Lisa EM, Baresic, Anja, Orengo, Christine A, Martin, Andrew CR, Valencia, Alfonso
Publicado 2011

Identification of hyper-rewired genomic stress non-oncogene addiction genes across 15 cancer types

por Hjaltelin, Jessica Xin, Izarzugaza, Jose M. G., Jensen, Lars Juhl, Russo, Francesco, Westergaard, David, Brunak, Søren
Publicado 2019

An integrated approach to the interpretation of Single Amino Acid Polymorphisms within the framework of CATH and Gene3D

por Izarzugaza, Jose MG, Baresic, Anja, McMillan, Lisa EM, Yeats, Corin, Clegg, Andrew B, Orengo, Christine A, Martin, Andrew CR, Valencia, Alfonso
Publicado 2009

Tumor Mutation Burden Forecasts Outcome in Ovarian Cancer with BRCA1 or BRCA2 Mutations

por Birkbak, Nicolai Juul, Kochupurakkal, Bose, Izarzugaza, Jose M. G., Eklund, Aron C., Li, Yang, Liu, Joyce, Szallasi, Zoltan, Matulonis, Ursula A., Richardson, Andrea L., Iglehart, J. Dirk, Wang, Zhigang C.
Publicado 2013

Propionibacterium acnes: Disease-Causing Agent or Common Contaminant? Detection in Diverse Patient Samples by Next-Generation Sequencing

por Mollerup, Sarah, Friis-Nielsen, Jens, Vinner, Lasse, Hansen, Thomas Arn, Richter, Stine Raith, Fridholm, Helena, Herrera, Jose Alejandro Romero, Lund, Ole, Brunak, Søren, Izarzugaza, Jose M. G., Mourier, Tobias, Nielsen, Lars Peter, Hansen, Anders Johannes
Publicado 2016

Cutavirus in Cutaneous Malignant Melanoma

por Mollerup, Sarah, Fridholm, Helena, Vinner, Lasse, Kjartansdóttir, Kristín Rós, Friis-Nielsen, Jens, Asplund, Maria, Herrera, Jose A.R., Steiniche, Torben, Mourier, Tobias, Brunak, Søren, Willerslev, Eske, Izarzugaza, Jose M.G., Hansen, Anders J., Nielsen, Lars P.
Publicado 2017

Investigation of Human Cancers for Retrovirus by Low-Stringency Target Enrichment and High-Throughput Sequencing

por Vinner, Lasse, Mourier, Tobias, Friis-Nielsen, Jens, Gniadecki, Robert, Dybkaer, Karen, Rosenberg, Jacob, Langhoff, Jill Levin, Cruz, David Flores Santa, Fonager, Jannik, Izarzugaza, Jose M. G., Gupta, Ramneek, Sicheritz-Ponten, Thomas, Brunak, Søren, Willerslev, Eske, Nielsen, Lars Peter, Hansen, Anders Johannes
Publicado 2015

Analysis of a gene panel for targeted sequencing of colorectal cancer samples

por Jensen, Klaus Højgaard, Izarzugaza, Jose M.G., Juncker, Agnieszka Sierakowska, Hansen, Rasmus Borup, Hansen, Torben Frøstrup, Timshel, Pascal, Blondal, Thorarinn, Jensen, Thomas Skøt, Rygaard-Hjalsted, Eske, Mouritzen, Peter, Thorsen, Michael, Wernersson, Rasmus, Nielsen, Henrik Bjørn, Jakobsen, Anders, Brunak, Søren, Sørensen, Flemming Brandt
Publicado 2018

Systems genetics analysis identifies calcium-signaling defects as novel cause of congenital heart disease

por Izarzugaza, Jose M. G., Ellesøe, Sabrina G., Doganli, Canan, Ehlers, Natasja Spring, Dalgaard, Marlene D., Audain, Enrique, Dombrowsky, Gregor, Banasik, Karina, Sifrim, Alejandro, Wilsdon, Anna, Thienpont, Bernard, Breckpot, Jeroen, Gewillig, Marc, Brook, J. David, Hitz, Marc-Phillip, Larsen, Lars A., Brunak, Søren
Publicado 2020

Identification of Known and Novel Recurrent Viral Sequences in Data from Multiple Patients and Multiple Cancers

por Friis-Nielsen, Jens, Kjartansdóttir, Kristín Rós, Mollerup, Sarah, Asplund, Maria, Mourier, Tobias, Jensen, Randi Holm, Hansen, Thomas Arn, Rey-Iglesia, Alba, Richter, Stine Raith, Nielsen, Ida Broman, Alquezar-Planas, David E., Olsen, Pernille V. S., Vinner, Lasse, Fridholm, Helena, Nielsen, Lars Peter, Willerslev, Eske, Sicheritz-Pontén, Thomas, Lund, Ole, Hansen, Anders Johannes, Izarzugaza, Jose M. G., Brunak, Søren
Publicado 2016