Development and Implementation of Whole Genome Sequencing-Based Typing Schemes for Clostridioides difficile

por Janezic, Sandra, Rupnik, Maja
Publicado 2019

Low overlap between carbapenem resistant Pseudomonas aeruginosa genotypes isolated from hospitalized patients and wastewater treatment plants

por Golle, Andrej, Janezic, Sandra, Rupnik, Maja
Publicado 2017

Clostridium difficile genotypes other than ribotype 078 that are prevalent among human, animal and environmental isolates

por Janezic, Sandra, Ocepek, Matjaz, Zidaric, Valerija, Rupnik, Maja
Publicado 2012

Highly Divergent Clostridium difficile Strains Isolated from the Environment

por Janezic, Sandra, Potocnik, Mojca, Zidaric, Valerija, Rupnik, Maja
Publicado 2016

Whole Genome Sequencing and Comparative Genomics of Two Nematicidal Bacillus Strains Reveals a Wide Range of Possible Virulence Factors

por Susič, Nik, Janežič, Sandra, Rupnik, Maja, Stare, Barbara Gerič
Publicado 2020

Changing Epidemiology of Presumptive Community-associated-methicillin-resistant Staphylococcus Aureus in Slovenia in 2014-2015 Compared To 2010

por Dermota, Urška, Košnik, Irena Grmek, Janežič, Sandra, Rupnik, Maja
Publicado 2020

Recombination Drives Evolution of the Clostridium difficile 16S-23S rRNA Intergenic Spacer Region

por Janezic, Sandra, Indra, Alexander, Rattei, Thomas, Weinmaier, Thomas, Rupnik, Maja
Publicado 2014

Genomic insights into antibiotic resistance and mobilome of lactic acid bacteria and bifidobacteria

por Rozman, Vita, Mohar Lorbeg, Petra, Treven, Primož, Accetto, Tomaž, Janežič, Sandra, Rupnik, Maja, Bogovič Matijašić, Bojana
Publicado 2023

Ribotype Classification of Clostridioides difficile Isolates Is Not Predictive of the Amino Acid Sequence Diversity of the Toxin Virulence Factors TcdA and TcdB

por Li, Zhenghui, Lee, Kwok, Rajyaguru, Urvi, Jones, C. Hal, Janezic, Sandra, Rupnik, Maja, Anderson, Annaliesa S., Liberator, Paul
Publicado 2020

Comparative genomics of Clostridioides difficile toxinotypes identifies module-based toxin gene evolution

por Janezic, Sandra, Dingle, Kate, Alvin, Joseph, Accetto, Tomaž, Didelot, Xavier, Crook, Derrick W., Lacy, D. Borden, Rupnik, Maja
Publicado 2020

Clostridioides difficile positivity rate and PCR ribotype distribution on retail potatoes in 12 European countries, January to June 2018

por Tkalec, Valerija, Viprey, Virginie, Davis, Georgina, Janezic, Sandra, Sente, Béatrice, Devos, Nathalie, Wilcox, Mark, Davies, Kerrie, Rupnik, Maja
Publicado 2022

Milder outcomes of SARS-CoV-2 genetically confirmed reinfections compared to primary infections with the delta variant: A retrospective case-control study

por Suljič, Alen, Sočan, Maja, Mrzel, Maja, Lunar, Maja M., Korva, Miša, Štorman, Alenka, Prosenc, Katarina, Janežič, Sandra, Žohar-Čretnik, Tjaša, Zupanič, Tina, Poljak, Mario, Avšič-Županc, Tatjana
Publicado 2022

Accuracy of Allplex SARS-CoV-2 assay amplification curve analysis for the detection of SARS-CoV-2 variant Alpha

por Čretnik, Tjaša Ž, Retelj, Matjaž, Janežič, Sandra, Mahnič, Aleksander, Tesovnik, Tine, Šket, Robert, Bizjan, Barbara J, Jeverica, Samo, Ravnik, Mateja, Rak, Mitja, Borinc, Mateja, Rupnik, Maja, Battelino, Tadej, Pokorn, Marko, Kovač, Jernej
Publicado 2022

Identification of novel, cryptic Clostridioides species isolates from environmental samples collected from diverse geographical locations

por Williamson, Charles Hall Davis, Stone, Nathan E., Nunnally, Amalee E., Roe, Chandler C., Vazquez, Adam J., Lucero, Samantha A., Hornstra, Heidie, Wagner, David M., Keim, Paul, Rupnik, Maja, Janezic, Sandra, Sahl, Jason William
Publicado 2022

International Clostridium difficile animal strain collection and large diversity of animal associated strains

por Janezic, Sandra, Zidaric, Valerija, Pardon, Bart, Indra, Alexander, Kokotovic, Branko, Blanco, Jose Luis, Seyboldt, Christian, Diaz, Cristina Rodriguez, Poxton, Ian R, Perreten, Vincent, Drigo, Ilenia, Jiraskova, Alena, Ocepek, Matjaz, Weese, J Scott, Songer, J Glenn, Wilcox, Mark H, Rupnik, Maja
Publicado 2014

SARS-CoV-2 molecular epidemiology in Slovenia, January to September 2021

por Janezic, Sandra, Mahnic, Aleksander, Kuhar, Urška, Kovač, Jernej, Jenko Bizjan, Barbara, Koritnik, Tom, Tesovnik, Tine, Šket, Robert, Krapež, Uroš, Slavec, Brigita, Malovrh, Tadej, Battelino, Tadej, Rupnik, Maja, Zohar Cretnik, Tjasa, Borinc, Mateja, Bosilj, Martin, Cimerman, Mojca, Cvetko, David, Cvetković, Tina, Gobec, Nika, Golle, Andrej, Harlander, Tatjana, Jarčič, Maša, Kavka, Daša, Korošec, Monika, Petrevčič, Marjana, Rak, Mitja, Ravnik, Mateja, Retelj, Matjaž, Strugar, Gašper, Štorman, Alenka, Tominc, Kaja, Volmajer, Nika, Kozmos, Katarina, Grom, Ana, Debeljak, Maruša, Pokorn, Marko
Publicado 2023