liqDB: a small-RNAseq knowledge discovery database for liquid biopsy studies

por Aparicio-Puerta, Ernesto, Jáspez, David, Lebrón, Ricardo, Koppers-Lalic, Danijela, Marchal, Juan A, Hackenberg, Michael
Publicado 2019

From Samples to Germline and Somatic Sequence Variation: A Focus on Next-Generation Sequencing in Melanoma Research

por Muñoz-Barrera, Adrián, Rubio-Rodríguez, Luis A., Díaz-de Usera, Ana, Jáspez, David, Lorenzo-Salazar, José M., González-Montelongo, Rafaela, García-Olivares, Víctor, Flores, Carlos
Publicado 2022

sRNAbench and sRNAtoolbox 2019: intuitive fast small RNA profiling and differential expression

por Aparicio-Puerta, Ernesto, Lebrón, Ricardo, Rueda, Antonio, Gómez-Martín, Cristina, Giannoukakos, Stavros, Jaspez, David, Medina, José María, Zubkovic, Andreja, Jurak, Igor, Fromm, Bastian, Marchal, Juan Antonio, Oliver, José, Hackenberg, Michael
Publicado 2019

A benchmarking of human mitochondrial DNA haplogroup classifiers from whole-genome and whole-exome sequence data

por García-Olivares, Víctor, Muñoz-Barrera, Adrián, Lorenzo-Salazar, José M., Zaragoza-Trello, Carlos, Rubio-Rodríguez, Luis A., Díaz-de Usera, Ana, Jáspez, David, Iñigo-Campos, Antonio, González-Montelongo, Rafaela, Flores, Carlos
Publicado 2021

Benchmarking of human Y-chromosomal haplogroup classifiers with whole-genome and whole-exome sequence data

por García-Olivares, Víctor, Muñoz-Barrera, Adrián, Rubio-Rodríguez, Luis A., Jáspez, David, Díaz-de Usera, Ana, Iñigo-Campos, Antonio, Veeramah, Krishna R., Alonso, Santos, Thomas, Mark G., Lorenzo-Salazar, José M., González-Montelongo, Rafaela, Flores, Carlos
Publicado 2023

Digging into the admixture strata of current-day Canary Islanders based on mitogenomes

por García-Olivares, Víctor, Rubio-Rodríguez, Luis A., Muñoz-Barrera, Adrián, Díaz-de Usera, Ana, Jáspez, David, Iñigo-Campos, Antonio, Rodríguez Pérez, María Del Cristo, Cabrera de León, Antonio, Lorenzo-Salazar, José M., González-Montelongo, Rafaela, Cabrera, Vicente M., Flores, Carlos
Publicado 2022

Developing CIRdb as a catalog of natural genetic variation in the Canary Islanders

por Díaz-de Usera, Ana, Rubio-Rodríguez, Luis A., Muñoz-Barrera, Adrián, Lorenzo-Salazar, Jose M., Guillen-Guio, Beatriz, Jáspez, David, Corrales, Almudena, Íñigo-Campos, Antonio, García-Olivares, Víctor, Rodríguez Pérez, María Del Cristo, Marcelino-Rodríguez, Itahisa, Cabrera de León, Antonio, González-Montelongo, Rafaela, Flores, Carlos
Publicado 2022

Curated variation benchmarks for challenging medically-relevant autosomal genes

por Wagner, Justin, Olson, Nathan D, Harris, Lindsay, McDaniel, Jennifer, Cheng, Haoyu, Fungtammasan, Arkarachai, Hwang, Yih-Chii, Gupta, Richa, Wenger, Aaron M, Rowell, William J, Khan, Ziad M, Farek, Jesse, Zhu, Yiming, Pisupati, Aishwarya, Mahmoud, Medhat, Xiao, Chunlin, Yoo, Byunggil, Sahraeian, Sayed Mohammad Ebrahim, Miller, Danny E., Jáspez, David, Lorenzo-Salazar, José M., Muñoz-Barrera, Adrián, Rubio-Rodríguez, Luis A., Flores, Carlos, Narzisi, Giuseppe, Evani, Uday Shanker, Clarke, Wayne E., Lee, Joyce, Mason, Christopher E., Lincoln, Stephen E., Miga, Karen H., Ebbert, Mark T. W., Shumate, Alaina, Li, Heng, Chin, Chen-Shan, Zook, Justin M, Sedlazeck, Fritz J
Publicado 2022

PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions

por Olson, Nathan D., Wagner, Justin, McDaniel, Jennifer, Stephens, Sarah H., Westreich, Samuel T., Prasanna, Anish G., Johanson, Elaine, Boja, Emily, Maier, Ezekiel J., Serang, Omar, Jáspez, David, Lorenzo-Salazar, José M., Muñoz-Barrera, Adrián, Rubio-Rodríguez, Luis A., Flores, Carlos, Kyriakidis, Konstantinos, Malousi, Andigoni, Shafin, Kishwar, Pesout, Trevor, Jain, Miten, Paten, Benedict, Chang, Pi-Chuan, Kolesnikov, Alexey, Nattestad, Maria, Baid, Gunjan, Goel, Sidharth, Yang, Howard, Carroll, Andrew, Eveleigh, Robert, Bourgey, Mathieu, Bourque, Guillaume, Li, Gen, Ma, ChouXian, Tang, LinQi, Du, YuanPing, Zhang, ShaoWei, Morata, Jordi, Tonda, Raúl, Parra, Genís, Trotta, Jean-Rémi, Brueffer, Christian, Demirkaya-Budak, Sinem, Kabakci-Zorlu, Duygu, Turgut, Deniz, Kalay, Özem, Budak, Gungor, Narcı, Kübra, Arslan, Elif, Brown, Richard, Johnson, Ivan J., Dolgoborodov, Alexey, Semenyuk, Vladimir, Jain, Amit, Tetikol, H. Serhat, Jain, Varun, Ruehle, Mike, Lajoie, Bryan, Roddey, Cooper, Catreux, Severine, Mehio, Rami, Ahsan, Mian Umair, Liu, Qian, Wang, Kai, Ebrahim Sahraeian, Sayed Mohammad, Fang, Li Tai, Mohiyuddin, Marghoob, Hung, Calvin, Jain, Chirag, Feng, Hanying, Li, Zhipan, Chen, Luoqi, Sedlazeck, Fritz J., Zook, Justin M.
Publicado 2022