Efficient Simulations of Solvent Asymmetry Across Lipid Membranes Using Flat-Bottom Restraints

por Biriukov, Denys, Javanainen, Matti
Publicado 2023

Protein Crowding and Cholesterol Increase Cell Membrane Viscosity in a Temperature Dependent Manner

por Fábián, Balázs, Vattulainen, Ilpo, Javanainen, Matti
Publicado 2023

Nanoscale Membrane Domain Formation Driven by Cholesterol

por Javanainen, Matti, Martinez-Seara, Hector, Vattulainen, Ilpo
Publicado 2017

Excessive aggregation of membrane proteins in the Martini model

por Javanainen, Matti, Martinez-Seara, Hector, Vattulainen, Ilpo
Publicado 2017

Accurate Simulations of Lipid Monolayers Require a Water Model with Correct Surface Tension

por Tempra, Carmelo, Ollila, O. H. Samuli, Javanainen, Matti
Publicado 2022

Crystalline Wax Esters Regulate the Evaporation Resistance of Tear Film Lipid Layers Associated with Dry Eye Syndrome

por Paananen, Riku O., Javanainen, Matti, Holopainen, Juha M., Vattulainen, Ilpo
Publicado 2019

Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance

por Enkavi, Giray, Javanainen, Matti, Kulig, Waldemar, Róg, Tomasz, Vattulainen, Ilpo
Publicado 2019

The Two Faces of the Liquid Ordered Phase

por Schachter, Itay, Paananen, Riku O., Fábián, Balázs, Jurkiewicz, Piotr, Javanainen, Matti
Publicado 2022

How Anacetrapib Inhibits the Activity of the Cholesteryl Ester Transfer Protein? Perspective through Atomistic Simulations

por Äijänen, Tarja, Koivuniemi, Artturi, Javanainen, Matti, Rissanen, Sami, Rog, Tomasz, Vattulainen, Ilpo
Publicado 2014

Nonconverged Constraints Cause Artificial Temperature Gradients in Lipid Bilayer Simulations

por Thallmair, Sebastian, Javanainen, Matti, Fábián, Balázs, Martinez-Seara, Hector, Marrink, Siewert J.
Publicado 2021

Surfactant Proteins SP-B and SP-C in Pulmonary Surfactant Monolayers: Physical Properties Controlled by Specific Protein–Lipid Interactions

por Liekkinen, Juho, Olżyńska, Agnieszka, Cwiklik, Lukasz, Bernardino de la Serna, Jorge, Vattulainen, Ilpo, Javanainen, Matti
Publicado 2023

Quantitative Comparison against Experiments Reveals Imperfections in Force Fields’ Descriptions of POPC–Cholesterol Interactions

por Javanainen, Matti, Heftberger, Peter, Madsen, Jesper J., Miettinen, Markus S., Pabst, Georg, Ollila, O. H. Samuli
Publicado 2023

Reduced level of docosahexaenoic acid shifts GPCR neuroreceptors to less ordered membrane regions

por Javanainen, Matti, Enkavi, Giray, Guixà-Gonzaléz, Ramon, Kulig, Waldemar, Martinez-Seara, Hector, Levental, Ilya, Vattulainen, Ilpo
Publicado 2019

Mechanism of allosteric regulation of β(2)-adrenergic receptor by cholesterol

por Manna, Moutusi, Niemelä, Miia, Tynkkynen, Joona, Javanainen, Matti, Kulig, Waldemar, Müller, Daniel J, Rog, Tomasz, Vattulainen, Ilpo
Publicado 2016

The role of hydrophobic matching on transmembrane helix packing in cells

por Grau, Brayan, Javanainen, Matti, García-Murria, Maria Jesús, Kulig, Waldemar, Vattulainen, Ilpo, Mingarro, Ismael, Martínez-Gil, Luis
Publicado 2017

Enzymatic Oxidation of Cholesterol: Properties and Functional Effects of Cholestenone in Cell Membranes

por Neuvonen, Maarit, Manna, Moutusi, Mokkila, Sini, Javanainen, Matti, Rog, Tomasz, Liu, Zheng, Bittman, Robert, Vattulainen, Ilpo, Ikonen, Elina
Publicado 2014

Understanding the Functional Properties of Lipid Heterogeneity in Pulmonary Surfactant Monolayers at the Atomistic Level

por Liekkinen, Juho, de Santos Moreno, Berta, Paananen, Riku O., Vattulainen, Ilpo, Monticelli, Luca, Bernardino de la Serna, Jorge, Javanainen, Matti
Publicado 2020

Membrane omega-3 fatty acids modulate the oligomerisation kinetics of adenosine A(2A) and dopamine D(2) receptors

por Guixà-González, Ramon, Javanainen, Matti, Gómez-Soler, Maricel, Cordobilla, Begoña, Domingo, Joan Carles, Sanz, Ferran, Pastor, Manuel, Ciruela, Francisco, Martinez-Seara, Hector, Selent, Jana
Publicado 2016

Ionic Strength and Solution Composition Dictate the Adsorption of Cell-Penetrating Peptides onto Phosphatidylcholine Membranes

por Nguyen, Man Thi Hong, Biriukov, Denys, Tempra, Carmelo, Baxova, Katarina, Martinez-Seara, Hector, Evci, Hüseyin, Singh, Vandana, Šachl, Radek, Hof, Martin, Jungwirth, Pavel, Javanainen, Matti, Vazdar, Mario
Publicado 2022

Arginine-rich cell-penetrating peptides induce membrane multilamellarity and subsequently enter via formation of a fusion pore

por Allolio, Christoph, Magarkar, Aniket, Jurkiewicz, Piotr, Baxová, Katarína, Javanainen, Matti, Mason, Philip E., Šachl, Radek, Cebecauer, Marek, Hof, Martin, Horinek, Dominik, Heinz, Veronika, Rachel, Reinhard, Ziegler, Christine M., Schröfel, Adam, Jungwirth, Pavel
Publicado 2018