PRAWNS: compact pan-genomic features for whole-genome population genomics

por Javkar, Kiran, Rand, Hugh, Strain, Errol, Pop, Mihai
Publicado 2022

Assessment of plasmids for relating the 2020 Salmonella enterica serovar Newport onion outbreak to farms implicated by the outbreak investigation

por Commichaux, Seth, Rand, Hugh, Javkar, Kiran, Molloy, Erin K., Pettengill, James B., Pightling, Arthur, Hoffmann, Maria, Pop, Mihai, Jayeola, Victor, Foley, Steven, Luo, Yan
Publicado 2023

Evaluating the accuracy of Listeria monocytogenes assemblies from quasimetagenomic samples using long and short reads

por Commichaux, Seth, Javkar, Kiran, Ramachandran, Padmini, Nagarajan, Niranjan, Bertrand, Denis, Chen, Yi, Reed, Elizabeth, Gonzalez-Escalona, Narjol, Strain, Errol, Rand, Hugh, Pop, Mihai, Ottesen, Andrea
Publicado 2021

Whole-Genome Assessment of Clinical Acinetobacter baumannii Isolates Uncovers Potentially Novel Factors Influencing Carbapenem Resistance

por Javkar, Kiran, Rand, Hugh, Hoffmann, Maria, Luo, Yan, Sarria, Saul, Thirunavukkarasu, Nagarajan, Pillai, Christine A., McGann, Patrick, Johnson, J. Kristie, Strain, Errol, Pop, Mihai
Publicado 2021

Genomic Drivers of Multidrug-Resistant Shigella Affecting Vulnerable Patient Populations in the United States and Abroad

por Worley, Jay Noboru, Javkar, Kiran, Hoffmann, Maria, Hysell, Kristen, Garcia-Williams, Amanda, Tagg, Kaitlin, Kanjilal, Sanjat, Strain, Errol, Pop, Mihai, Allard, Marc, Francois Watkins, Louise, Bry, Lynn
Publicado 2021

NCBI’s Virus Discovery Codeathon: Building “FIVE” —The Federated Index of Viral Experiments API Index

por Martí-Carreras, Joan, Gener, Alejandro Rafael, Miller, Sierra D., Brito, Anderson F., Camacho, Christiam E., Connor, Ryan, Deboutte, Ward, Glickman, Cody, Kristensen, David M., Meyer, Wynn K., Modha, Sejal, Norris, Alexis L., Saha, Surya, Belford, Anna K., Biederstedt, Evan, Brister, James Rodney, Buchmann, Jan P., Cooley, Nicholas P., Edwards, Robert A., Javkar, Kiran, Muchow, Michael, Muralidharan, Harihara Subrahmaniam, Pepe-Ranney, Charles, Shah, Nidhi, Shakya, Migun, Tisza, Michael J., Tully, Benjamin J., Vanmechelen, Bert, Virta, Valerie C., Weissman, JL, Zalunin, Vadim, Efremov, Alexandre, Busby, Ben
Publicado 2020

Current progress and future opportunities in applications of bioinformatics for biodefense and pathogen detection: report from the Winter Mid-Atlantic Microbiome Meet-up, College P...

por Meisel, Jacquelyn S., Nasko, Daniel J., Brubach, Brian, Cepeda-Espinoza, Victoria, Chopyk, Jessica, Corrada-Bravo, Héctor, Fedarko, Marcus, Ghurye, Jay, Javkar, Kiran, Olson, Nathan D., Shah, Nidhi, Allard, Sarah M., Bazinet, Adam L., Bergman, Nicholas H., Brown, Alexis, Caporaso, J. Gregory, Conlan, Sean, DiRuggiero, Jocelyne, Forry, Samuel P., Hasan, Nur A., Kralj, Jason, Luethy, Paul M., Milton, Donald K., Ondov, Brian D., Preheim, Sarah, Ratnayake, Shashikala, Rogers, Stephanie M., Rosovitz, M. J., Sakowski, Eric G., Schliebs, Nils Oliver, Sommer, Daniel D., Ternus, Krista L., Uritskiy, Gherman, Zhang, Sean X., Pop, Mihai, Treangen, Todd J.
Publicado 2018