Algorithms for computing the double cut and join distance on both gene order and intergenic sizes

por Fertin, Guillaume, Jean, Géraldine, Tannier, Eric
Publicado 2017

Hybrid de novo tandem repeat detection using short and long reads

por Fertin, Guillaume, Jean, Géraldine, Radulescu, Andreea, Rusu, Irena
Publicado 2015

Evaluation of open search methods based on theoretical mass spectra comparison

por Lysiak, Albane, Fertin, Guillaume, Jean, Géraldine, Tessier, Dominique
Publicado 2021

Super short operations on both gene order and intergenic sizes

por Oliveira, Andre R., Jean, Géraldine, Fertin, Guillaume, Dias, Ulisses, Dias, Zanoni
Publicado 2019

A 3.5-Approximation Algorithm for Sorting by Intergenic Transpositions

por Oliveira, Andre Rodrigues, Jean, Géraldine, Fertin, Guillaume, Brito, Klairton Lima, Dias, Ulisses, Dias, Zanoni
Publicado 2020

Oqtans: the RNA-seq workbench in the cloud for complete and reproducible quantitative transcriptome analysis

por Sreedharan, Vipin T., Schultheiss, Sebastian J., Jean, Géraldine, Kahles, André, Bohnert, Regina, Drewe, Philipp, Mudrakarta, Pramod, Görnitz, Nico, Zeller, Georg, Rätsch, Gunnar
Publicado 2014

Oqtans: a multifunctional workbench for RNA-seq data analysis

por Sreedharan, Vipin T, Schultheiss, Sebastian J, Jean, Géraldine, Kahles, André, Bohnert, Regina, Drewe, Philipp, Mudrakarta, Pramod, Görnitz, Nico, Zeller, Georg, Rätsch, Gunnar
Publicado 2014

Fast alignment of mass spectra in large proteomics datasets, capturing dissimilarities arising from multiple complex modifications of peptides

por Prunier, Grégoire, Cherkaoui, Mehdi, Lysiak, Albane, Langella, Olivier, Blein-Nicolas, Mélisande, Lollier, Virginie, Benoist, Emile, Jean, Géraldine, Fertin, Guillaume, Rogniaux, Hélène, Tessier, Dominique
Publicado 2023

Oqtans: a Galaxy-integrated workflow for quantitative transcriptome analysis from NGS Data

por Schultheiss, Sebastian J, Jean, Géraldine, Behr, Jonas, Bohnert, Regina, Drewe, Philipp, Görnitz, Nico, Kahles, André, Mudrakarta, Pramod, Sreedharan, Vipin T, Zeller, Georg, Rätsch, Gunnar
Publicado 2011

DNA methylation in Arabidopsis has a genetic basis and shows evidence of local adaptation

por Dubin, Manu J, Zhang, Pei, Meng, Dazhe, Remigereau, Marie-Stanislas, Osborne, Edward J, Paolo Casale, Francesco, Drewe, Philipp, Kahles, André, Jean, Geraldine, Vilhjálmsson, Bjarni, Jagoda, Joanna, Irez, Selen, Voronin, Viktor, Song, Qiang, Long, Quan, Rätsch, Gunnar, Stegle, Oliver, Clark, Richard M, Nordborg, Magnus
Publicado 2015

Structure and co-occurrence patterns in microbial communities under acute environmental stress reveal ecological factors fostering resilience

por Mandakovic, Dinka, Rojas, Claudia, Maldonado, Jonathan, Latorre, Mauricio, Travisany, Dante, Delage, Erwan, Bihouée, Audrey, Jean, Géraldine, Díaz, Francisca P., Fernández-Gómez, Beatriz, Cabrera, Pablo, Gaete, Alexis, Latorre, Claudio, Gutiérrez, Rodrigo A., Maass, Alejandro, Cambiazo, Verónica, Navarrete, Sergio A., Eveillard, Damien, González, Mauricio
Publicado 2018

Multiple reference genomes and transcriptomes for Arabidopsis thaliana

por Gan, Xiangchao, Stegle, Oliver, Behr, Jonas, Steffen, Joshua G., Drewe, Philipp, Hildebrand, Katie L., Lyngsoe, Rune, Schultheiss, Sebastian J., Osborne, Edward J., Sreedharan, Vipin T., Kahles, André, Bohnert, Regina, Jean, Géraldine, Derwent, Paul, Kersey, Paul, Belfield, Eric J., Harberd, Nicholas P., Kemen, Eric, Toomajian, Christopher, Kover, Paula X., Clark, Richard M., Rátsch, Gunnar, Mott, Richard
Publicado 2011