Computational methods for protein localization prediction

por Jiang, Yuexu, Wang, Duolin, Wang, Weiwei, Xu, Dong
Publicado 2021

Variation in Gene Expression between Two Sorghum bicolor Lines Differing in Innate Immunity Response

por Cui, Yaya, Chen, Dongqin, Jiang, Yuexu, Xu, Dong, Balint-Kurti, Peter, Stacey, Gary
Publicado 2021

Proteomic and Bioinformatic Profiling of Transporters in Higher Plant Mitochondria

por Møller, Ian Max, Rao, R. Shyama Prasad, Jiang, Yuexu, Thelen, Jay J., Xu, Dong
Publicado 2020

DM3Loc: multi-label mRNA subcellular localization prediction and analysis based on multi-head self-attention mechanism

por Wang, Duolin, Zhang, Zhaoyue, Jiang, Yuexu, Mao, Ziting, Wang, Dong, Lin, Hao, Xu, Dong
Publicado 2021

MULocDeep web service for protein localization prediction and visualization at subcellular and suborganellar levels

por Jiang, Yuexu, Jiang, Lei, Akhil, Chopparapu Sai, Wang, Duolin, Zhang, Ziyang, Zhang, Weinan, Xu, Dong
Publicado 2023

MULocDeep: A deep-learning framework for protein subcellular and suborganellar localization prediction with residue-level interpretation

por Jiang, Yuexu, Wang, Duolin, Yao, Yifu, Eubel, Holger, Künzler, Patrick, Møller, Ian Max, Xu, Dong
Publicado 2021

MusiteDeep: a deep-learning based webserver for protein post-translational modification site prediction and visualization

por Wang, Duolin, Liu, Dongpeng, Yuchi, Jiakang, He, Fei, Jiang, Yuexu, Cai, Siteng, Li, Jingyi, Xu, Dong
Publicado 2020

Transcriptomics Analysis Reveals New Insights into the Roles of Notch1 Signaling on Macrophage Polarization

por Hans, Chetan P., Sharma, Neekun, Sen, Sidharth, Zeng, Shuai, Dev, Rishabh, Jiang, Yuexu, Mahajan, Advitiya, Joshi, Trupti
Publicado 2019

scGNN is a novel graph neural network framework for single-cell RNA-Seq analyses

por Wang, Juexin, Ma, Anjun, Chang, Yuzhou, Gong, Jianting, Jiang, Yuexu, Qi, Ren, Wang, Cankun, Fu, Hongjun, Ma, Qin, Xu, Dong
Publicado 2021

Author Correction: scGNN is a novel graph neural network framework for single-cell RNA-Seq analyses

por Wang, Juexin, Ma, Anjun, Chang, Yuzhou, Gong, Jianting, Jiang, Yuexu, Qi, Ren, Wang, Cankun, Fu, Hongjun, Ma, Qin, Xu, Dong
Publicado 2022

Single-cell RNA sequencing to characterize the response of pancreatic cancer to anti-PD-1 immunotherapy

por Zhou, Jing, Jiang, Yuexu, Huang, Yue, Wang, Qiongling, Kaifi, Jussuf T., Kimchi, Eric T., Chabu, Chiswili Yves, Liu, Zhenguo, Joshi, Trupti, Li, Guangfu
Publicado 2021

Single-cell biological network inference using a heterogeneous graph transformer

por Ma, Anjun, Wang, Xiaoying, Li, Jingxian, Wang, Cankun, Xiao, Tong, Liu, Yuntao, Cheng, Hao, Wang, Juexin, Li, Yang, Chang, Yuzhou, Li, Jinpu, Wang, Duolin, Jiang, Yuexu, Su, Li, Xin, Gang, Gu, Shaopeng, Li, Zihai, Liu, Bingqiang, Xu, Dong, Ma, Qin
Publicado 2023

Transcription Factor β-Catenin Plays a Key Role in Fluid Flow Shear Stress-Mediated Glomerular Injury in Solitary Kidney

por Srivastava, Tarak, Heruth, Daniel P., Duncan, R. Scott, Rezaiekhaligh, Mohammad H., Garola, Robert E., Priya, Lakshmi, Zhou, Jianping, Boinpelly, Varun C., Novak, Jan, Ali, Mohammed Farhan, Joshi, Trupti, Alon, Uri S., Jiang, Yuexu, McCarthy, Ellen T., Savin, Virginia J., Sharma, Ram, Johnson, Mark L., Sharma, Mukut
Publicado 2021

A mouse model of prenatal exposure to Interleukin-6 to study the developmental origin of health and disease

por Srivastava, Tarak, Joshi, Trupti, Heruth, Daniel P., Rezaiekhaligh, Mohammad H., Garola, Robert E., Zhou, Jianping, Boinpelly, Varun C., Ali, Mohammed Farhan, Alon, Uri S., Sharma, Madhulika, Vanden Heuvel, Gregory B., Mahajan, Pramod, Priya, Lakshmi, Jiang, Yuexu, McCarthy, Ellen T., Savin, Virginia J., Sharma, Ram, Sharma, Mukut
Publicado 2021