Network analysis between neuron dysfunction and neuroimmune response based on neural single-cell transcriptome of COVID-19 patients

por Lin, Xiaoyu, Nie, Huan, Tang, Ran, Wang, Pingping, Jin, Xiyun, Jiang, Qinghua, Han, Fang, Chen, Na, Li, Yu
Publicado 2022

FACER: comprehensive molecular and functional characterization of epigenetic chromatin regulators

por Lu, Jianping, Xu, Juan, Li, Junyi, Pan, Tao, Bai, Jing, Wang, Liqiang, Jin, Xiyun, Lin, Xiaoyu, Zhang, Yunpeng, Li, Yongsheng, Sahni, Nidhi, Li, Xia
Publicado 2018

Integrative Analysis for Elucidating Transcriptomics Landscapes of Glucocorticoid-Induced Osteoporosis

por Ying, Xiaoxia, Jin, Xiyun, Wang, Pingping, He, Yuzhu, Zhang, Haomiao, Ren, Xiang, Chai, Songling, Fu, Wenqi, Zhao, Pengcheng, Chen, Chen, Ma, Guowu, Liu, Huiying
Publicado 2020

MutCov: A pipeline for evaluating the effect of mutations in spike protein on infectivity and antigenicity of SARS-CoV-2

por Zhou, Wenyang, Xu, Chang, Luo, Meng, Wang, Pingping, Xu, Zhaochun, Xue, Guangfu, Jin, Xiyun, Huang, Yan, Li, Yiqun, Nie, Huan, Jiang, Qinghua, Anashkina, Anastasia A.
Publicado 2022

LncMAP: Pan-cancer atlas of long noncoding RNA-mediated transcriptional network perturbations

por Li, Yongsheng, Li, Lili, Wang, Zishan, Pan, Tao, Sahni, Nidhi, Jin, Xiyun, Wang, Guangjuan, Li, Junyi, Zheng, Xiangyi, Zhang, Yunpeng, Xu, Juan, Yi, Song, Li, Xia
Publicado 2018

Characterization of Transcriptome Transition Associates Long Noncoding RNAs with Glioma Progression

por Lin, Xiaoyu, Jiang, Tiantongfei, Bai, Jing, Li, Junyi, Wang, Tianshi, Xiao, Jun, Tian, Yi, Jin, Xiyun, Shao, Tingting, Xu, Juan, Chen, Lingchao, Wang, Lihua, Li, Yongsheng
Publicado 2018

Identification of potential vaccine targets for COVID‐19 by combining single‐cell and bulk TCR sequencing

por Wang, Pingping, Xu, Zhaochun, Zhou, Wenyang, Jin, Xiyun, Xu, Chang, Luo, Meng, Ma, Kexin, Cao, Huimin, Huang, Yan, Lin, Xiaoyu, Pang, Fenglan, Li, Yiqun, Jiang, Qinghua
Publicado 2021

Alternative splicing associated with cancer stemness in kidney renal clear cell carcinoma

por Xiao, Lixing, Zou, Guoying, Cheng, Rui, Wang, Pingping, Ma, Kexin, Cao, Huimin, Zhou, Wenyang, Jin, Xiyun, Xu, Zhaochun, Huang, Yan, Lin, Xiaoyu, Nie, Huan, Jiang, Qinghua
Publicado 2021

N439K Variant in Spike Protein Alter the Infection Efficiency and Antigenicity of SARS-CoV-2 Based on Molecular Dynamics Simulation

por Zhou, Wenyang, Xu, Chang, Wang, Pingping, Luo, Meng, Xu, Zhaochun, Cheng, Rui, Jin, Xiyun, Guo, Yu, Xue, Guangfu, Juan, Liran, Anashkina, Anastasia A., Nie, Huan, Jiang, Qinghua
Publicado 2021

Comprehensive analysis of TCR repertoire in COVID-19 using single cell sequencing

por Wang, Pingping, Jin, Xiyun, Zhou, Wenyang, Luo, Meng, Xu, Zhaochun, Xu, Chang, Li, Yiqun, Ma, Kexin, Cao, Huimin, Huang, Yan, Xue, Guangfu, Jin, Shuilin, Nie, Huan, Jiang, Qinghua
Publicado 2021

Global Characterization of Peripheral B Cells in Parkinson’s Disease by Single-Cell RNA and BCR Sequencing

por Wang, Pingping, Luo, Meng, Zhou, Wenyang, Jin, Xiyun, Xu, Zhaochun, Yan, Shi, Li, Yiqun, Xu, Chang, Cheng, Rui, Huang, Yan, Lin, Xiaoyu, Yao, Lifen, Nie, Huan, Jiang, Qinghua
Publicado 2022

Krüppel-like Transcription Factor 7 Is a Causal Gene in Autism Development

por Tian, Hui, Qiao, Shupei, Zhao, Yufang, Jin, Xiyun, Wang, Cao, Wang, Ruiqi, Wang, Yilin, Jiao, Yanwen, Liu, Ying, Zhang, Bosong, Jin, Jiaming, Chen, Yue, Jiang, Qinghua, Tian, Weiming
Publicado 2022

DeepCCI: a deep learning framework for identifying cell–cell interactions from single-cell RNA sequencing data

por Yang, Wenyi, Wang, Pingping, Luo, Meng, Cai, Yideng, Xu, Chang, Xue, Guangfu, Jin, Xiyun, Cheng, Rui, Que, Jinhao, Pang, Fenglan, Yang, Yuexin, Nie, Huan, Jiang, Qinghua, Liu, Zhigang, Xu, Zhaochun
Publicado 2023

Single cell RNA and immune repertoire profiling of COVID-19 patients reveal novel neutralizing antibody

por Li, Fang, Luo, Meng, Zhou, Wenyang, Li, Jinliang, Jin, Xiyun, Xu, Zhaochun, Juan, Liran, Zhang, Zheng, Li, Yuou, Liu, Renqiang, Li, Yiqun, Xu, Chang, Ma, Kexin, Cao, Huimin, Wang, Jingwei, Wang, Pingping, Bu, Zhigao, Jiang, Qinghua
Publicado 2020

DeepST: identifying spatial domains in spatial transcriptomics by deep learning

por Xu, Chang, Jin, Xiyun, Wei, Songren, Wang, Pingping, Luo, Meng, Xu, Zhaochun, Yang, Wenyi, Cai, Yideng, Xiao, Lixing, Lin, Xiaoyu, Liu, Hongxin, Cheng, Rui, Pang, Fenglan, Chen, Rui, Su, Xi, Hu, Ying, Wang, Guohua, Jiang, Qinghua
Publicado 2022

Single-cell transcriptome and TCR profiling reveal activated and expanded T cell populations in Parkinson’s disease

por Wang, Pingping, Yao, Lifen, Luo, Meng, Zhou, Wenyang, Jin, Xiyun, Xu, Zhaochun, Yan, Shi, Li, Yiqun, Xu, Chang, Cheng, Rui, Huang, Yan, Lin, Xiaoyu, Ma, Kexin, Cao, Huimin, Liu, Hongxin, Xue, Guangfu, Han, Fang, Nie, Huan, Jiang, Qinghua
Publicado 2021