Right data for right patient—a precisionFDA NCI–CPTAC Multi-omics Mislabeling Challenge

by Boja, Emily, Težak, Živana, Zhang, Bing, Wang, Pei, Johanson, Elaine, Hinton, Denise, Rodriguez, Henry
Published 2018

OpenFDA: an innovative platform providing access to a wealth of FDA’s publicly available data

by Kass-Hout, Taha A, Xu, Zhiheng, Mohebbi, Matthew, Nelsen, Hans, Baker, Adam, Levine, Jonathan, Johanson, Elaine, Bright, Roselie A
Published 2016

A community effort to identify and correct mislabeled samples in proteogenomic studies

by Yoo, Seungyeul, Shi, Zhiao, Wen, Bo, Kho, SoonJye, Pan, Renke, Feng, Hanying, Chen, Hong, Carlsson, Anders, Edén, Patrik, Ma, Weiping, Raymer, Michael, Maier, Ezekiel J., Tezak, Zivana, Johanson, Elaine, Hinton, Denise, Rodriguez, Henry, Zhu, Jun, Boja, Emily, Wang, Pei, Zhang, Bing
Published 2021

Enabling precision medicine via standard communication of HTS provenance, analysis, and results

by Alterovitz, Gil, Dean, Dennis, Goble, Carole, Crusoe, Michael R., Soiland-Reyes, Stian, Bell, Amanda, Hayes, Anais, Suresh, Anita, Purkayastha, Anjan, King, Charles H., Taylor, Dan, Johanson, Elaine, Thompson, Elaine E., Donaldson, Eric, Morizono, Hiroki, Tsang, Hsinyi, Vora, Jeet K., Goecks, Jeremy, Yao, Jianchao, Almeida, Jonas S., Keeney, Jonathon, Addepalli, KanakaDurga, Krampis, Konstantinos, Smith, Krista M., Guo, Lydia, Walderhaug, Mark, Schito, Marco, Ezewudo, Matthew, Guimera, Nuria, Walsh, Paul, Kahsay, Robel, Gottipati, Srikanth, Rodwell, Timothy C., Bloom, Toby, Lai, Yuching, Simonyan, Vahan, Mazumder, Raja
Published 2018

The Brain Tumor Segmentation (BraTS) Challenge 2023: Brain MR Image Synthesis for Tumor Segmentation (BraSyn)

by Li, Hongwei Bran, Conte, Gian Marco, Anwar, Syed Muhammad, Kofler, Florian, Ezhov, Ivan, van Leemput, Koen, Piraud, Marie, Diaz, Maria, Cole, Byrone, Calabrese, Evan, Rudie, Jeff, Meissen, Felix, Adewole, Maruf, Janas, Anastasia, Kazerooni, Anahita Fathi, LaBella, Dominic, Moawad, Ahmed W., Farahani, Keyvan, Eddy, James, Bergquist, Timothy, Chung, Verena, Shinohara, Russell Takeshi, Dako, Farouk, Wiggins, Walter, Reitman, Zachary, Wang, Chunhao, Liu, Xinyang, Jiang, Zhifan, Familiar, Ariana, Johanson, Elaine, Meier, Zeke, Davatzikos, Christos, Freymann, John, Kirby, Justin, Bilello, Michel, Fathallah-Shaykh, Hassan M., Wiest, Roland, Kirschke, Jan, Colen, Rivka R., Kotrotsou, Aikaterini, Lamontagne, Pamela, Marcus, Daniel, Milchenko, Mikhail, Nazeri, Arash, Weber, Marc-André, Mahajan, Abhishek, Mohan, Suyash, Mongan, John, Hess, Christopher, Cha, Soonmee, Villanueva-Meyer, Javier, Colak, Errol, Crivellaro, Priscila, Jakab, Andras, Albrecht, Jake, Anazodo, Udunna, Aboian, Mariam, Yu, Thomas, Chung, Verena, Bergquist, Timothy, Eddy, James, Albrecht, Jake, Baid, Ujjwal, Bakas, Spyridon, Linguraru, Marius George, Menze, Bjoern, Iglesias, Juan Eugenio, Wiestler, Benedikt
Published 2023

PrecisionFDA Truth Challenge V2: Calling variants from short and long reads in difficult-to-map regions

by Olson, Nathan D., Wagner, Justin, McDaniel, Jennifer, Stephens, Sarah H., Westreich, Samuel T., Prasanna, Anish G., Johanson, Elaine, Boja, Emily, Maier, Ezekiel J., Serang, Omar, Jáspez, David, Lorenzo-Salazar, José M., Muñoz-Barrera, Adrián, Rubio-Rodríguez, Luis A., Flores, Carlos, Kyriakidis, Konstantinos, Malousi, Andigoni, Shafin, Kishwar, Pesout, Trevor, Jain, Miten, Paten, Benedict, Chang, Pi-Chuan, Kolesnikov, Alexey, Nattestad, Maria, Baid, Gunjan, Goel, Sidharth, Yang, Howard, Carroll, Andrew, Eveleigh, Robert, Bourgey, Mathieu, Bourque, Guillaume, Li, Gen, Ma, ChouXian, Tang, LinQi, Du, YuanPing, Zhang, ShaoWei, Morata, Jordi, Tonda, Raúl, Parra, Genís, Trotta, Jean-Rémi, Brueffer, Christian, Demirkaya-Budak, Sinem, Kabakci-Zorlu, Duygu, Turgut, Deniz, Kalay, Özem, Budak, Gungor, Narcı, Kübra, Arslan, Elif, Brown, Richard, Johnson, Ivan J., Dolgoborodov, Alexey, Semenyuk, Vladimir, Jain, Amit, Tetikol, H. Serhat, Jain, Varun, Ruehle, Mike, Lajoie, Bryan, Roddey, Cooper, Catreux, Severine, Mehio, Rami, Ahsan, Mian Umair, Liu, Qian, Wang, Kai, Ebrahim Sahraeian, Sayed Mohammad, Fang, Li Tai, Mohiyuddin, Marghoob, Hung, Calvin, Jain, Chirag, Feng, Hanying, Li, Zhipan, Chen, Luoqi, Sedlazeck, Fritz J., Zook, Justin M.
Published 2022

The Brain Tumor Segmentation (BraTS-METS) Challenge 2023: Brain Metastasis Segmentation on Pre-treatment MRI

by Moawad, Ahmed W., Janas, Anastasia, Baid, Ujjwal, Ramakrishnan, Divya, Jekel, Leon, Krantchev, Kiril, Moy, Harrison, Saluja, Rachit, Osenberg, Klara, Wilms, Klara, Kaur, Manpreet, Avesta, Arman, Pedersen, Gabriel Cassinelli, Maleki, Nazanin, Salimi, Mahdi, Merkaj, Sarah, von Reppert, Marc, Tillmans, Niklas, Lost, Jan, Bousabarah, Khaled, Holler, Wolfgang, Lin, MingDe, Westerhoff, Malte, Maresca, Ryan, Link, Katherine E., Tahon, Nourel hoda, Marcus, Daniel, Sotiras, Aristeidis, LaMontagne, Pamela, Chakrabarty, Strajit, Teytelboym, Oleg, Youssef, Ayda, Nada, Ayaman, Velichko, Yuri S., Gennaro, Nicolo, Cramer, Justin, Johnson, Derek R., Kwan, Benjamin Y.M., Petrovic, Boyan, Patro, Satya N., Wu, Lei, So, Tiffany, Thompson, Gerry, Kam, Anthony, Perez-Carrillo, Gloria Guzman, Lall, Neil, Albrecht, Jake, Anazodo, Udunna, Lingaru, Marius George, Menze, Bjoern H, Wiestler, Benedikt, Adewole, Maruf, Anwar, Syed Muhammad, Labella, Dominic, Li, Hongwei Bran, Iglesias, Juan Eugenio, Farahani, Keyvan, Eddy, James, Bergquist, Timothy, Chung, Verena, Shinohara, Russel Takeshi, Dako, Farouk, Wiggins, Walter, Reitman, Zachary, Wang, Chunhao, Liu, Xinyang, Jiang, Zhifan, Van Leemput, Koen, Piraud, Marie, Ezhov, Ivan, Johanson, Elaine, Meier, Zeke, Familiar, Ariana, Kazerooni, Anahita Fathi, Kofler, Florian, Calabrese, Evan, Aneja, Sanjay, Chiang, Veronica, Ikuta, Ichiro, Shafique, Umber, Memon, Fatima, Conte, Gian Marco, Bakas, Spyridon, Rudie, Jeffrey, Aboian, Mariam
Published 2023