Volumetric Semantic Instance Segmentation of the Plasma Membrane of HeLa Cells

por Karabağ, Cefa, Jones, Martin L., Reyes-Aldasoro, Constantino Carlos
Publicado 2021

ultraLM and miniLM: Locator tools for smart tracking of fluorescent cells in correlative light and electron microscopy

por Brama, Elisabeth, Peddie, Christopher J., Wilkes, Gary, Gu, Yan, Collinson, Lucy M., Jones, Martin L.
Publicado 2016

Sargasso Sea bacterioplankton community structure and drivers of variance as revealed by DNA metabarcoding analysis

por Gill, John Geoffrey, Hill-Spanik, Kristina M., Whittaker, Kerry A., Jones, Martin L., Plante, Craig
Publicado 2022

Semantic segmentation of HeLa cells: An objective comparison between one traditional algorithm and four deep-learning architectures

por Karabağ, Cefa, Jones, Martin L., Peddie, Christopher J., Weston, Anne E., Collinson, Lucy M., Reyes-Aldasoro, Constantino Carlos
Publicado 2020

Segmentation and Modelling of the Nuclear Envelope of HeLa Cells Imaged with Serial Block Face Scanning Electron Microscopy †

por Karabağ, Cefa, Jones, Martin L., Peddie, Christopher J., Weston, Anne E., Collinson, Lucy M., Reyes-Aldasoro, Constantino Carlos
Publicado 2019

PolNet: A Tool to Quantify Network-Level Cell Polarity and Blood Flow in Vascular Remodeling

por Bernabeu, Miguel O., Jones, Martin L., Nash, Rupert W., Pezzarossa, Anna, Coveney, Peter V., Gerhardt, Holger, Franco, Claudio A.
Publicado 2018

Synchronization of endothelial Dll4-Notch dynamics switch blood vessels from branching to expansion

por Ubezio, Benedetta, Blanco, Raquel Agudo, Geudens, Ilse, Stanchi, Fabio, Mathivet, Thomas, Jones, Martin L, Ragab, Anan, Bentley, Katie, Gerhardt, Holger
Publicado 2016

Online citizen science with the Zooniverse for analysis of biological volumetric data

por Smith, Patricia, King, Oliver N. F., Pennington, Avery, Tun, Win, Basham, Mark, Jones, Martin L., Collinson, Lucy M., Darrow, Michele C., Spiers, Helen
Publicado 2023

Bridging Imaging Users to Imaging Analysis - A community survey

por Sivagurunathan, Suganya, Marcotti, Stefania, Nelson, Carl J, Jones, Martin L, Barry, David J, Slater, Thomas J A, Eliceiri, Kevin W, Cimini, Beth A
Publicado 2023

Mycobacterium tuberculosis replicates within necrotic human macrophages

por Lerner, Thomas R., Borel, Sophie, Greenwood, Daniel J., Repnik, Urska, Russell, Matthew R.G., Herbst, Susanne, Jones, Martin L., Collinson, Lucy M., Griffiths, Gareth, Gutierrez, Maximiliano G.
Publicado 2017

Computer simulations reveal complex distribution of haemodynamic forces in a mouse retina model of angiogenesis

por Bernabeu, Miguel O., Jones, Martin L., Nielsen, Jens H., Krüger, Timm, Nash, Rupert W., Groen, Derek, Schmieschek, Sebastian, Hetherington, James, Gerhardt, Holger, Franco, Claudio A., Coveney, Peter V.
Publicado 2014

Dynamic Endothelial Cell Rearrangements Drive Developmental Vessel Regression

por Franco, Claudio A., Jones, Martin L., Bernabeu, Miguel O., Geudens, Ilse, Mathivet, Thomas, Rosa, Andre, Lopes, Felicia M., Lima, Aida P., Ragab, Anan, Collins, Russell T., Phng, Li-Kun, Coveney, Peter V., Gerhardt, Holger
Publicado 2015

Correction: Dynamic Endothelial Cell Rearrangements Drive Developmental Vessel Regression

por Franco, Claudio A., Jones, Martin L., Bernabeu, Miguel O., Geudens, Ilse, Mathivet, Thomas, Rosa, Andre, Lopes, Felicia M., Lima, Aida P., Ragab, Anan, Collins, Russell T., Phng, Li-Kun, Coveney, Peter V., Gerhardt, Holger
Publicado 2015

Non-canonical Wnt signalling modulates the endothelial shear stress flow sensor in vascular remodelling

por Franco, Claudio A, Jones, Martin L, Bernabeu, Miguel O, Vion, Anne-Clemence, Barbacena, Pedro, Fan, Jieqing, Mathivet, Thomas, Fonseca, Catarina G, Ragab, Anan, Yamaguchi, Terry P, Coveney, Peter V, Lang, Richard A, Gerhardt, Holger
Publicado 2016

Crosshair, semi-automated targeting for electron microscopy with a motorised ultramicrotome

por Meechan, Kimberly, Guan, Wei, Riedinger, Alfons, Stankova, Vera, Yoshimura, Azumi, Pipitone, Rosa, Milberger, Arthur, Schaar, Helmuth, Romero-Brey, Inés, Templin, Rachel, Peddie, Christopher J, Schieber, Nicole L, Jones, Martin L, Collinson, Lucy, Schwab, Yannick
Publicado 2022

3D correlative light and electron microscopy of cultured cells using serial blockface scanning electron microscopy

por Russell, Matthew R. G., Lerner, Thomas R., Burden, Jemima J., Nkwe, David O., Pelchen-Matthews, Annegret, Domart, Marie-Charlotte, Durgan, Joanne, Weston, Anne, Jones, Martin L., Peddie, Christopher J., Carzaniga, Raffaella, Florey, Oliver, Marsh, Mark, Gutierrez, Maximiliano G., Collinson, Lucy M.
Publicado 2017

Democratising deep learning for microscopy with ZeroCostDL4Mic

por von Chamier, Lucas, Laine, Romain F., Jukkala, Johanna, Spahn, Christoph, Krentzel, Daniel, Nehme, Elias, Lerche, Martina, Hernández-Pérez, Sara, Mattila, Pieta K., Karinou, Eleni, Holden, Séamus, Solak, Ahmet Can, Krull, Alexander, Buchholz, Tim-Oliver, Jones, Martin L., Royer, Loïc A., Leterrier, Christophe, Shechtman, Yoav, Jug, Florian, Heilemann, Mike, Jacquemet, Guillaume, Henriques, Ricardo
Publicado 2021

Building bridges between cellular and molecular structural biology

por Patwardhan, Ardan, Brandt, Robert, Butcher, Sarah J, Collinson, Lucy, Gault, David, Grünewald, Kay, Hecksel, Corey, Huiskonen, Juha T, Iudin, Andrii, Jones, Martin L, Korir, Paul K, Koster, Abraham J, Lagerstedt, Ingvar, Lawson, Catherine L, Mastronarde, David, McCormick, Matthew, Parkinson, Helen, Rosenthal, Peter B, Saalfeld, Stephan, Saibil, Helen R, Sarntivijai, Sirarat, Solanes Valero, Irene, Subramaniam, Sriram, Swedlow, Jason R, Tudose, Ilinca, Winn, Martyn, Kleywegt, Gerard J
Publicado 2017