Functional and genetic analysis of choroid plexus development in zebrafish

por Henson, Hannah E., Parupalli, Chaithanyarani, Ju, Bensheng, Taylor, Michael R.
Publicado 2014

Co-activation of hedgehog and AKT pathways promote tumorigenesis in zebrafish

por Ju, Bensheng, Spitsbergen, Jan, Eden, Christopher J, Taylor, Michael R, Chen, Wenbiao
Publicado 2009

A comparison of methods accounting for batch effects in differential expression analysis of UMI count based single cell RNA sequencing

por Chen, Wenan, Zhang, Silu, Williams, Justin, Ju, Bensheng, Shaner, Bridget, Easton, John, Wu, Gang, Chen, Xiang
Publicado 2020

Oncogenic KRAS promotes malignant brain tumors in zebrafish

por Ju, Bensheng, Chen, Wenbiao, Orr, Brent A, Spitsbergen, Jan M, Jia, Sujuan, Eden, Christopher J, Henson, Hannah E, Taylor, Michael R
Publicado 2015

Latent cellular analysis robustly reveals subtle diversity in large-scale single-cell RNA-seq data

por Cheng, Changde, Easton, John, Rosencrance, Celeste, Li, Yan, Ju, Bensheng, Williams, Justin, Mulder, Heather L, Pang, Yakun, Chen, Wenan, Chen, Xiang
Publicado 2019

Somatic LINE-1 promoter acquisition drives oncogenic FOXR2 activation in pediatric brain tumor

por Flasch, Diane A., Chen, Xiaolong, Ju, Bensheng, Li, Xiaoyu, Dalton, James, Mulder, Heather L., Easton, John, Wang, Lu, Baker, Suzanne J., Chiang, Jason, Zhang, Jinghui
Publicado 2022

Orthotopic models of pediatric brain tumors in zebrafish

por Eden, Christopher J., Ju, Bensheng, Murugesan, Mohankumar, Phoenix, Timothy, Nimmervoll, Birgit, Tong, Yiai, Ellison, David W., Finkelstein, David, Wright, Karen, Boulos, Nidal, Dapper, Jason, Thiruvenkatam, Radhika, Lessman, Charles, Taylor, Michael R., Gilbertson, Richard J.
Publicado 2014

Long-read sequencing unveils IGH-DUX4 translocation into the silenced IGH allele in B-cell acute lymphoblastic leukemia

por Tian, Liqing, Shao, Ying, Nance, Stephanie, Dang, Jinjun, Xu, Beisi, Ma, Xiaotu, Li, Yongjin, Ju, Bensheng, Dong, Li, Newman, Scott, Zhou, Xin, Schreiner, Patrick, Tseng, Elizabeth, Hon, Ting, Ashby, Meredith, Li, Chunliang, Easton, John, Gruber, Tanja A., Zhang, Jinghui
Publicado 2019

Convergent evolution and multi-wave clonal invasion in H3 K27-altered diffuse midline gliomas treated with a PDGFR inhibitor

por Arunachalam, Sasi, Szlachta, Karol, Brady, Samuel W., Ma, Xiaotu, Ju, Bensheng, Shaner, Bridget, Mulder, Heather L., Easton, John, Raphael, Benjamin J., Myers, Matthew, Tinkle, Christopher, Allen, Sariah J., Orr, Brent A., Wetmore, Cynthia J., Baker, Suzanne J., Zhang, Jinghui
Publicado 2022

Discovery of regulatory noncoding variants in individual cancer genomes by using cis-X

por Liu, Yu, Li, Chunliang, Shen, Shuhong, Chen, Xiaolong, Szlachta, Karol, Edmonson, Michael N., Shao, Ying, Ma, Xiaotu, Hyle, Judith, Wright, Shaela, Ju, Bensheng, Rusch, Michael C., Liu, Yanling, Li, Benshang, Macias, Michael, Tian, Liqing, Easton, John, Qian, Maoxiang, Yang, Jun J., Hu, Shaoyan, Look, A. Thomas, Zhang, Jinghui
Publicado 2020

Integrome signatures of lentiviral gene therapy for SCID-X1 patients

por Yan, Koon-Kiu, Condori, Jose, Ma, Zhijun, Metais, Jean-Yves, Ju, Bensheng, Ding, Liang, Dhungana, Yogesh, Palmer, Lance E., Langfitt, Deanna M., Ferrara, Francesca, Throm, Robert, Shi, Hao, Risch, Isabel, Bhatara, Sheetal, Shaner, Bridget, Lockey, Timothy D., Talleur, Aimee C., Easton, John, Meagher, Michael M., Puck, Jennifer M., Cowan, Morton J., Zhou, Sheng, Mamcarz, Ewelina, Gottschalk, Stephen, Yu, Jiyang
Publicado 2023

Integrative network analysis reveals USP7 haploinsufficiency inhibits E-protein activity in pediatric T-lineage acute lymphoblastic leukemia (T-ALL)

por Shaw, Timothy I., Dong, Li, Tian, Liqing, Qian, Chenxi, Liu, Yu, Ju, Bensheng, High, Anthony, Kavdia, Kanisha, Pagala, Vishwajeeth R., Shaner, Bridget, Pei, Deqing, Easton, John, Janke, Laura J., Porter, Shaina N., Ma, Xiaotu, Cheng, Cheng, Pruett-Miller, Shondra M., Choi, John, Yu, Jiyang, Peng, Junmin, Gu, Wei, Look, A. Thomas, Downing, James R., Zhang, Jinghui
Publicado 2021

The genomic landscape of diffuse intrinsic pontine glioma and pediatric non-brainstem high-grade glioma

por Wu, Gang, Diaz, Alexander K, Paugh, Barbara S, Rankin, Sherri L, Ju, Bensheng, Li, Yongjin, Zhu, Xiaoyan, Qu, Chunxu, Chen, Xiang, Zhang, Junyuan, Easton, John, Edmonson, Michael, Ma, Xiaotu, Lu, Charles, Nagahawatte, Panduka, Hedlund, Erin, Rusch, Michael, Pounds, Stanley, Lin, Tong, Onar-Thomas, Arzu, Huether, Robert, Kriwacki, Richard, Parker, Matthew, Gupta, Pankaj, Becksfort, Jared, Wei, Lei, Mulder, Heather L, Boggs, Kristy, Vadodaria, Bhavin, Yergeau, Donald, Russell, Jake C, Ochoa, Kerri, Fulton, Robert S, Fulton, Lucinda L, Jones, Chris, Boop, Frederick A, Broniscer, Alberto, Wetmore, Cynthia, Gajjar, Amar, Ding, Li, Mardis, Elaine R, Wilson, Richard K, Taylor, Michael R, Downing, James R, Ellison, David W, Zhang, Jinghui, Baker, Suzanne J
Publicado 2014