The Newick utilities: high-throughput phylogenetic tree processing in the Unix shell

por Junier, Thomas, Zdobnov, Evgeny M.
Publicado 2010

CEGA—a catalog of conserved elements from genomic alignments

por Dousse, Aline, Junier, Thomas, Zdobnov, Evgeny M.
Publicado 2016

MLgsc: A Maximum-Likelihood General Sequence Classifier

por Junier, Thomas, Hervé, Vincent, Wunderlin, Tina, Junier, Pilar
Publicado 2015

Genome-wide search reveals a novel GacA-regulated small RNA in Pseudomonas species

por González, Nicolas, Heeb, Stephan, Valverde, Claudio, Kay, Elisabeth, Reimmann, Cornelia, Junier, Thomas, Haas, Dieter
Publicado 2008

Assessment of fungal spores and spore-like diversity in environmental samples by targeted lysis

por Corona Ramirez, Andrea, Bregnard, Danaé, Junier, Thomas, Cailleau, Guillaume, Dorador, Cristina, Bindschedler, Saskia, Junier, Pilar
Publicado 2023

Community analysis of betaproteobacterial ammonia-oxidizing bacteria using the amoCAB operon

por Junier, Pilar, Kim, Ok-Sun, Junier, Thomas, Ahn, Tae-Seok, Imhoff, Johannes F., Witzel, Karl-Paul
Publicado 2009

Under-detection of endospore-forming Firmicutes in metagenomic data

por Filippidou, Sevasti, Junier, Thomas, Wunderlin, Tina, Lo, Chien-Chi, Li, Po-E, Chain, Patrick S., Junier, Pilar
Publicado 2015

A Combination of Extreme Environmental Conditions Favor the Prevalence of Endospore-Forming Firmicutes

por Filippidou, Sevasti, Wunderlin, Tina, Junier, Thomas, Jeanneret, Nicole, Dorador, Cristina, Molina, Veronica, Johnson, David R., Junier, Pilar
Publicado 2016

New complete genome sequences of human rhinoviruses shed light on their phylogeny and genomic features

por Tapparel, Caroline, Junier, Thomas, Gerlach, Daniel, Cordey, Samuel, Van Belle, Sandra, Perrin, Luc, Zdobnov, Evgeny M, Kaiser, Laurent
Publicado 2007

A historical legacy of antibiotic utilization on bacterial seed banks in sediments

por Madueño, Laura, Paul, Christophe, Junier, Thomas, Bayrychenko, Zhanna, Filippidou, Sevasti, Beck, Karin, Greub, Gilbert, Bürgmann, Helmut, Junier, Pilar
Publicado 2018

Dissemination of antibiotic resistance genes associated with the sporobiota in sediments impacted by wastewater

por Paul, Christophe, Bayrychenko, Zhanna, Junier, Thomas, Filippidou, Sevasti, Beck, Karin, Bueche, Matthieu, Greub, Gilbert, Bürgmann, Helmut, Junier, Pilar
Publicado 2018

Phylogenetic and functional marker genes to study ammonia-oxidizing microorganisms (AOM) in the environment

por Junier, Pilar, Molina, Verónica, Dorador, Cristina, Hadas, Ora, Kim, Ok-Sun, Junier, Thomas, Witzel, Karl-Paul, Imhoff, Johannes F.
Publicado 2009

Rhinovirus Genome Evolution during Experimental Human Infection

por Cordey, Samuel, Junier, Thomas, Gerlach, Daniel, Gobbini, Francesca, Farinelli, Laurent, Zdobnov, Evgeny M., Winther, Birgit, Tapparel, Caroline, Kaiser, Laurent
Publicado 2010

Genome Sequence of Kosakonia radicincitans Strain YD4, a Plant Growth-Promoting Rhizobacterium Isolated from Yerba Mate (Ilex paraguariensis St. Hill.)

por Bergottini, Veronica M., Filippidou, Sevasti, Junier, Thomas, Johnson, Shannon, Chain, Patrick S., Otegui, Monica B., Zapata, Pedro D., Junier, Pilar
Publicado 2015

Rhinovirus Genome Variation during Chronic Upper and Lower Respiratory Tract Infections

por Tapparel, Caroline, Cordey, Samuel, Junier, Thomas, Farinelli, Laurent, Van Belle, Sandra, Soccal, Paola M., Aubert, John-David, Zdobnov, Evgeny, Kaiser, Laurent
Publicado 2011

Virosaurus A Reference to Explore and Capture Virus Genetic Diversity

por Gleizes, Anne, Laubscher, Florian, Guex, Nicolas, Iseli, Christian, Junier, Thomas, Cordey, Samuel, Fellay, Jacques, Xenarios, Ioannis, Kaiser, Laurent, Mercier, Philippe Le
Publicado 2020

MAR‐Mediated transgene integration into permissive chromatin and increased expression by recombination pathway engineering

por Kostyrko, Kaja, Neuenschwander, Samuel, Junier, Thomas, Regamey, Alexandre, Iseli, Christian, Schmid‐Siegert, Emanuel, Bosshard, Sandra, Majocchi, Stefano, Le Fourn, Valérie, Girod, Pierre‐Alain, Xenarios, Ioannis, Mermod, Nicolas
Publicado 2016

Genome Sequence of Bacillus alveayuensis Strain 24KAM51, a Halotolerant Thermophile Isolated from a Hydrothermal Vent

por Filippidou, Sevasti, Wunderlin, Tina, Junier, Thomas, Jeanneret, Nicole, Johnson, Shannon, McMurry, Kim, Gleasner, Cheryl D., Lo, Chien-Chi, Li, Po-E, Vuyisich, Momchilo, Chain, Patrick S., Junier, Pilar
Publicado 2015

New Respiratory Enterovirus and Recombinant Rhinoviruses among Circulating Picornaviruses

por Tapparel, Caroline, Junier, Thomas, Gerlach, Daniel, Van Belle, Sandra, Turin, Lara, Cordey, Samuel, Mühlemann, Kathrin, Regamey, Nicolas, Aubert, John-David, Soccal, Paola M., Eigenmann, Philippe, Zdobnov, Evgeny, Kaiser, Laurent
Publicado 2009

Contribution of Genetic Background and Clinical Risk Factors to Low-Trauma Fractures in Human Immunodeficiency Virus (HIV)-Positive Persons: The Swiss HIV Cohort Study

por Junier, Thomas, Rotger, Margalida, Biver, Emmanuel, Ledergerber, Bruno, Barceló, Catalina, Bartha, Istvan, Kovari, Helen, Schmid, Patrick, Fux, Christoph, Bernasconi, Enos, Brun del Re, Claudia, Weber, Rainer, Fellay, Jacques, Tarr, Philip E.
Publicado 2016