Logical Gene Ontology Annotations (GOAL): exploring gene ontology annotations with OWL

por Jupp, Simon, Stevens, Robert, Hoehndorf, Robert
Publicado 2012

Developing a kidney and urinary pathway knowledge base

por Jupp, Simon, Klein, Julie, Schanstra, Joost, Stevens, Robert
Publicado 2011

Comparison, alignment, and synchronization of cell line information between CLO and EFO

por Ong, Edison, Sarntivijai, Sirarat, Jupp, Simon, Parkinson, Helen, He, Yongqun
Publicado 2017

Features of a FAIR vocabulary

por Xu, Fuqi, Juty, Nick, Goble, Carole, Jupp, Simon, Parkinson, Helen, Courtot, Mélanie
Publicado 2023

Ten Simple Rules for Selecting a Bio-ontology

por Malone, James, Stevens, Robert, Jupp, Simon, Hancocks, Tom, Parkinson, Helen, Brooksbank, Cath
Publicado 2016

Webulous and the Webulous Google Add-On - a web service and application for ontology building from templates

por Jupp, Simon, Burdett, Tony, Welter, Danielle, Sarntivijai, Sirarat, Parkinson, Helen, Malone, James
Publicado 2016

Issues in learning an ontology from text

por Brewster, Christopher, Jupp, Simon, Luciano, Joanne, Shotton, David, Stevens, Robert D, Zhang, Ziqi
Publicado 2009

The KUPNetViz: a biological network viewer for multiple -omics datasets in kidney diseases

por Moulos, Panagiotis, Klein, Julie, Jupp, Simon, Stevens, Robert, Bascands, Jean-Loup, Schanstra, Joost P
Publicado 2013

Populous: a tool for building OWL ontologies from templates

por Jupp, Simon, Horridge, Matthew, Iannone, Luigi, Klein, Julie, Owen, Stuart, Schanstra, Joost, Wolstencroft, Katy, Stevens, Robert
Publicado 2012

Developing a web-based SKOS editor

por Conway, Mike, Khojoyan, Artem, Fana, Fariba, Scuba, William, Castine, Melissa, Mowery, Danielle, Chapman, Wendy, Jupp, Simon
Publicado 2016

OLS Client and OLS Dialog: Open Source Tools to Annotate Public Omics Datasets

por Perez‐Riverol, Yasset, Ternent, Tobias, Koch, Maximilian, Barsnes, Harald, Vrousgou, Olga, Jupp, Simon, Vizcaíno, Juan Antonio
Publicado 2017

The cellular microscopy phenotype ontology

por Jupp, Simon, Malone, James, Burdett, Tony, Heriche, Jean-Karim, Williams, Eleanor, Ellenberg, Jan, Parkinson, Helen, Rustici, Gabriella
Publicado 2016

A user-centred evaluation framework for the Sealife semantic web browsers

por Oliver, Helen, Diallo, Gayo, de Quincey, Ed, Alexopoulou, Dimitra, Habermann, Bianca, Kostkova, Patty, Schroeder, Michael, Jupp, Simon, Khelif, Khaled, Stevens, Robert, Jawaheer, Gawesh, Madle, Gemma
Publicado 2009

Linking rare and common disease: mapping clinical disease-phenotypes to ontologies in therapeutic target validation

por Sarntivijai, Sirarat, Vasant, Drashtti, Jupp, Simon, Saunders, Gary, Bento, A. Patrícia, Gonzalez, Daniel, Betts, Joanna, Hasan, Samiul, Koscielny, Gautier, Dunham, Ian, Parkinson, Helen, Malone, James
Publicado 2016

ELIXIR biovalidator for semantic validation of life science metadata

por Liyanage, Isuru, Burdett, Tony, Droesbeke, Bert, Erdos, Karoly, Fernandez, Rolando, Gray, Alasdair, Haseeb, Muhammad, Jupp, Simon, Penim, Flavia, Pommier, Cyril, Rocca-Serra, Philippe, Courtot, Mélanie, Coppens, Frederik
Publicado 2022

The Hearing Impairment Ontology: A Tool for Unifying Hearing Impairment Knowledge to Enhance Collaborative Research

por Hotchkiss, Jade, Manyisa, Noluthando, Mawuli Adadey, Samuel, Oluwole, Oluwafemi Gabriel, Wonkam, Edmond, Mnika, Khuthala, Yalcouye, Abdoulaye, Nembaware, Victoria, Haendel, Melissa, Vasilevsky, Nicole, Mulder, Nicola J., Jupp, Simon, Wonkam, Ambroise, K. Mazandu, Gaston
Publicado 2019

The EBI RDF platform: linked open data for the life sciences

por Jupp, Simon, Malone, James, Bolleman, Jerven, Brandizi, Marco, Davies, Mark, Garcia, Leyla, Gaulton, Anna, Gehant, Sebastien, Laibe, Camille, Redaschi, Nicole, Wimalaratne, Sarala M., Martin, Maria, Le Novère, Nicolas, Parkinson, Helen, Birney, Ewan, Jenkinson, Andrew M.
Publicado 2014

A compendium of uniformly processed human gene expression and splicing quantitative trait loci

por Kerimov, Nurlan, Hayhurst, James D., Peikova, Kateryna, Manning, Jonathan R., Walter, Peter, Kolberg, Liis, Samoviča, Marija, Sakthivel, Manoj Pandian, Kuzmin, Ivan, Trevanion, Stephen J., Burdett, Tony, Jupp, Simon, Parkinson, Helen, Papatheodorou, Irene, Yates, Andrew D., Zerbino, Daniel R., Alasoo, Kaur
Publicado 2021

Expression Atlas update—a database of gene and transcript expression from microarray- and sequencing-based functional genomics experiments

por Petryszak, Robert, Burdett, Tony, Fiorelli, Benedetto, Fonseca, Nuno A., Gonzalez-Porta, Mar, Hastings, Emma, Huber, Wolfgang, Jupp, Simon, Keays, Maria, Kryvych, Nataliya, McMurry, Julie, Marioni, John C., Malone, James, Megy, Karine, Rustici, Gabriella, Tang, Amy Y., Taubert, Jan, Williams, Eleanor, Mannion, Oliver, Parkinson, Helen E., Brazma, Alvis
Publicado 2014

Expression Atlas update—an integrated database of gene and protein expression in humans, animals and plants

por Petryszak, Robert, Keays, Maria, Tang, Y. Amy, Fonseca, Nuno A., Barrera, Elisabet, Burdett, Tony, Füllgrabe, Anja, Fuentes, Alfonso Muñoz-Pomer, Jupp, Simon, Koskinen, Satu, Mannion, Oliver, Huerta, Laura, Megy, Karine, Snow, Catherine, Williams, Eleanor, Barzine, Mitra, Hastings, Emma, Weisser, Hendrik, Wright, James, Jaiswal, Pankaj, Huber, Wolfgang, Choudhary, Jyoti, Parkinson, Helen E., Brazma, Alvis
Publicado 2016