The antineoplastic drug, trastuzumab, dysregulates metabolism in iPSC-derived cardiomyocytes

por Necela, Brian M., Axenfeld, Bianca C., Serie, Daniel J., Kachergus, Jennifer M., Perez, Edith A., Thompson, E. Aubrey, Norton, Nadine
Publicado 2017

Senescent and disease-associated microglia are modifiable features of aged brain white matter

por Carver, Chase M., Gomez, Paul T., Rodriguez, Sonia L., Kachergus, Jennifer M., Liu, Yi, Shi, Ji, Tran, Tommy, Wang, Liguo, Melov, Simon, Thompson, E. Aubrey, Schafer, Marissa J.
Publicado 2023

The eSNV-detect: a computational system to identify expressed single nucleotide variants from transcriptome sequencing data

por Tang, Xiaojia, Baheti, Saurabh, Shameer, Khader, Thompson, Kevin J., Wills, Quin, Niu, Nifang, Holcomb, Ilona N., Boutet, Stephane C., Ramakrishnan, Ramesh, Kachergus, Jennifer M., Kocher, Jean-Pierre A., Weinshilboum, Richard M., Wang, Liewei, Thompson, E. Aubrey, Kalari, Krishna R.
Publicado 2014

Gene Expression, Single Nucleotide Variant and Fusion Transcript Discovery in Archival Material from Breast Tumors

por Norton, Nadine, Sun, Zhifu, Asmann, Yan W., Serie, Daniel J., Necela, Brian M., Bhagwate, Aditya, Jen, Jin, Eckloff, Bruce W., Kalari, Krishna R., Thompson, Kevin J., Carr, Jennifer M., Kachergus, Jennifer M., Geiger, Xochiquetzal J., Perez, Edith A., Thompson, E. Aubrey
Publicado 2013

Assessment of Tumor Heterogeneity, as Evidenced by Gene Expression Profiles, Pathway Activation, and Gene Copy Number, in Patients with Multifocal Invasive Lobular Breast Tumors

por Norton, Nadine, Advani, Pooja P., Serie, Daniel J., Geiger, Xochiquetzal J., Necela, Brian M., Axenfeld, Bianca C., Kachergus, Jennifer M., Feathers, Ryan W., Carr, Jennifer M., Crook, Julia E., Moreno-Aspitia, Alvaro, Anastasiadis, Panos Z., Perez, Edith A., Thompson, E. Aubrey
Publicado 2016

Chromoanasynthesis is a common mechanism that leads to ERBB2 amplifications in a cohort of early stage HER2(+) breast cancer samples

por Vasmatzis, George, Wang, Xue, Smadbeck, James B., Murphy, Stephen J., Geiersbach, Katherine B., Johnson, Sarah H., Gaitatzes, Athanasios G., Asmann, Yan W., Kosari, Farhad, Borad, Mitesh J., Serie, Daniel J., McLaughlin, Sarah A., Kachergus, Jennifer M., Necela, Brian M., Aubrey Thompson, E.
Publicado 2018

Elevated methylation levels, reduced expression levels, and frequent contractions in a clinical cohort of C9orf72 expansion carriers

por Jackson, Jazmyne L., Finch, NiCole A., Baker, Matthew C., Kachergus, Jennifer M., DeJesus-Hernandez, Mariely, Pereira, Kimberly, Christopher, Elizabeth, Prudencio, Mercedes, Heckman, Michael G., Thompson, E. Aubrey, Dickson, Dennis W., Shah, Jaimin, Oskarsson, Björn, Petrucelli, Leonard, Rademakers, Rosa, van Blitterswijk, Marka
Publicado 2020

Association of Genetic Variants at TRPC6 With Chemotherapy-Related Heart Failure

por Norton, Nadine, Crook, Julia E., Wang, Liwei, Olson, Janet E., Kachergus, Jennifer M., Serie, Daniel J., Necela, Brian M., Borgman, Paul G., Advani, Pooja P., Ray, Jordan C., Landolfo, Carolyn, Di Florio, Damian N., Hill, Anneliese R., Bruno, Katelyn A., Fairweather, DeLisa
Publicado 2020

Characteristics and Spatially Defined Immune (micro)landscapes of Early-stage PD-L1–positive Triple-negative Breast Cancer

por Carter, Jodi M., Polley, Mei-Yin C., Leon-Ferre, Roberto A., Sinnwell, Jason, Thompson, Kevin J., Wang, Xue, Ma, Yaohua, Zahrieh, David, Kachergus, Jennifer M., Solanki, Malvika, Boughey, Judy C., Liu, Minetta C., Ingle, James N., Kalari, Krishna R., Couch, Fergus J., Thompson, E. Aubrey, Goetz, Matthew P.
Publicado 2021

Evidence of cerebellar TDP-43 loss of function in FTLD-TDP

por Pickles, Sarah, Gendron, Tania F., Koike, Yuka, Yue, Mei, Song, Yuping, Kachergus, Jennifer M., Shi, J., DeTure, Michael, Thompson, E. Aubrey, Oskarsson, Björn, Graff-Radford, Neill R., Boeve, Bradley F., Petersen, Ronald C., Wszolek, Zbigniew K., Josephs, Keith A., Dickson, Dennis W., Petrucelli, Leonard, Cook, Casey N., Prudencio, Mercedes
Publicado 2022

Folate Receptor-α (FOLR1) Expression and Function in Triple Negative Tumors

por Necela, Brian M., Crozier, Jennifer A., Andorfer, Cathy A., Lewis-Tuffin, Laura, Kachergus, Jennifer M., Geiger, Xochiquetzal J., Kalari, Krishna R., Serie, Daniel J., Sun, Zhifu, Aspita, Alvaro Moreno, O’Shannessy, Daniel J., Maltzman, Julia D., McCullough, Ann E., Pockaj, Barbara A., Cunliffe, Heather E., Ballman, Karla V., Thompson, E. Aubrey, Perez, Edith A.
Publicado 2015

Correction: Folate Receptor-α (FOLR1) Expression and Function in Triple Negative Tumors

por Necela, Brian M., Crozier, Jennifer A., Andorfer, Cathy A., Lewis-Tuffin, Laura, Kachergus, Jennifer M., Geiger, Xochiquetzal J., Kalari, Krishna R., Serie, Daniel J., Sun, Zhifu, Moreno-Aspitia, Alvaro, O’Shannessy, Daniel J., Maltzman, Julia D., McCullough, Ann E., Pockaj, Barbara A., Cunliffe, Heather E., Ballman, Karla V., Thompson, E. Aubrey, Perez, Edith A.
Publicado 2015

DCTN1 mutations in Perry syndrome

por Farrer, Matthew J., Hulihan, Mary M., Kachergus, Jennifer M., Dächsel, Justus, Stoessl, A. Jon, Grantier, Linda L., Calne, Susan, Calne, Donald B., Lechevalier, Bernard, Chapon, Francoise, Tsuboi, Yoshio, Yamada, Tatsuo, Gutmann, Ludwig, Elibol, Bülent, Bhatia, Kailash P., Wider, Christian W., Vilariño-Güell, Carles, Ross, Owen A., Brown, Laura A., Castanedes-Casey, Monica, Dickson, Dennis W., Wszolek, Zbigniew K.
Publicado 2009

Deep Sequence Analysis of Non-Small Cell Lung Cancer: Integrated Analysis of Gene Expression, Alternative Splicing, and Single Nucleotide Variations in Lung Adenocarcinomas with an...

por Kalari, Krishna R., Rossell, David, Necela, Brian M., Asmann, Yan W., Nair, Asha, Baheti, Saurabh, Kachergus, Jennifer M., Younkin, Curtis S., Baker, Tiffany, Carr, Jennifer M., Tang, Xiaojia, Walsh, Michael P., Chai, High-Seng, Sun, Zhifu, Hart, Steven N., Leontovich, Alexey A., Hossain, Asif, Kocher, Jean-Pierre, Perez, Edith A., Reisman, David N., Fields, Alan P., Thompson, E. Aubrey
Publicado 2012

An Integrated Model of the Transcriptome of HER2-Positive Breast Cancer

por Kalari, Krishna R., Necela, Brian M., Tang, Xiaojia, Thompson, Kevin J., Lau, Melissa, Eckel-Passow, Jeanette E., Kachergus, Jennifer M., Anderson, S. Keith, Sun, Zhifu, Baheti, Saurabh, Carr, Jennifer M., Baker, Tiffany R., Barman, Poulami, Radisky, Derek C., Joseph, Richard W., McLaughlin, Sarah A., Chai, High-seng, Camille, Stephan, Rossell, David, Asmann, Yan W., Thompson, E. Aubrey, Perez, Edith A.
Publicado 2013

Towards defining morphologic parameters of normal parous and nulliparous breast tissues by artificial intelligence

por Ogony, Joshua, de Bel, Thomas, Radisky, Derek C., Kachergus, Jennifer, Thompson, E. Aubrey, Degnim, Amy C., Ruddy, Kathryn J., Hilton, Tracy, Stallings-Mann, Melody, Vachon, Celine, Hoskin, Tanya L., Heckman, Michael G., Vierkant, Robert A., White, Launia J., Moore, Raymond M., Carter, Jodi, Jensen, Matthew, Pacheco-Spann, Laura, Henry, Jill E., Storniolo, Anna Maria, Winham, Stacey J., van der Laak, Jeroen, Sherman, Mark E.
Publicado 2022

Distinct spatial immune microlandscapes are independently associated with outcomes in triple-negative breast cancer

por Carter, Jodi M., Chumsri, Saranya, Hinerfeld, Douglas A., Ma, Yaohua, Wang, Xue, Zahrieh, David, Hillman, David W., Tenner, Kathleen S., Kachergus, Jennifer M., Brauer, Heather Ann, Warren, Sarah E., Henderson, David, Shi, Ji, Liu, Yi, Joensuu, Heikki, Lindman, Henrik, Leon-Ferre, Roberto A., Boughey, Judy C., Liu, Minetta C., Ingle, James N., Kalari, Krishna R., Couch, Fergus J., Knutson, Keith L., Goetz, Matthew P., Perez, Edith A., Thompson, E. Aubrey
Publicado 2023

Rejuvenation of the aged brain immune cell landscape in mice through p16-positive senescent cell clearance

por Zhang, Xu, Pearsall, Vesselina M., Carver, Chase M., Atkinson, Elizabeth J., Clarkson, Benjamin D. S., Grund, Ethan M., Baez-Faria, Michelle, Pavelko, Kevin D., Kachergus, Jennifer M., White, Thomas A., Johnson, Renee K., Malo, Courtney S., Gonzalez-Suarez, Alan M., Ayasoufi, Katayoun, Johnson, Kurt O., Tritz, Zachariah P., Fain, Cori E., Khadka, Roman H., Ogrodnik, Mikolaj, Jurk, Diana, Zhu, Yi, Tchkonia, Tamara, Revzin, Alexander, Kirkland, James L., Johnson, Aaron J., Howe, Charles L., Thompson, E. Aubrey, LeBrasseur, Nathan K., Schafer, Marissa J.
Publicado 2022