DeCAF: a novel method to identify cell-type specific regulatory variants and their role in cancer risk

por Kalita, Cynthia A., Gusev, Alexander
Publicado 2022

Which Genetics Variants in DNase-Seq Footprints Are More Likely to Alter Binding?

por Moyerbrailean, Gregory A., Kalita, Cynthia A., Harvey, Chris T., Wen, Xiaoquan, Luca, Francesca, Pique-Regi, Roger
Publicado 2016

High-throughput characterization of genetic effects on DNA–protein binding and gene transcription

por Kalita, Cynthia A., Brown, Christopher D., Freiman, Andrew, Isherwood, Jenna, Wen, Xiaoquan, Pique-Regi, Roger, Luca, Francesca
Publicado 2018

A signature of Neanderthal introgression on molecular mechanisms of environmental responses

por Findley, Anthony S., Zhang, Xinjun, Boye, Carly, Lin, Yen Lung, Kalita, Cynthia A., Barreiro, Luis, Lohmueller, Kirk E., Pique-Regi, Roger, Luca, Francesca
Publicado 2021

High-throughput allele-specific expression across 250 environmental conditions

por Moyerbrailean, Gregory A., Richards, Allison L., Kurtz, Daniel, Kalita, Cynthia A., Davis, Gordon O., Harvey, Chris T., Alazizi, Adnan, Watza, Donovan, Sorokin, Yoram, Hauff, Nancy, Zhou, Xiang, Wen, Xiaoquan, Pique-Regi, Roger, Luca, Francesca
Publicado 2016

Functional dynamic genetic effects on gene regulation are specific to particular cell types and environmental conditions

por Findley, Anthony S, Monziani, Alan, Richards, Allison L, Rhodes, Katherine, Ward, Michelle C, Kalita, Cynthia A, Alazizi, Adnan, Pazokitoroudi, Ali, Sankararaman, Sriram, Wen, Xiaoquan, Lanfear, David E, Pique-Regi, Roger, Gilad, Yoav, Luca, Francesca
Publicado 2021