Genome-wide search for Zelda-like chromatin signatures identifies GAF as a pioneer factor in early fly development

por Moshe, Arbel, Kaplan, Tommy
Publicado 2017

Ab Initio Prediction of Transcription Factor Targets Using Structural Knowledge

por Kaplan, Tommy, Friedman, Nir, Margalit, Hanah
Publicado 2005

Predicting gene knockout effects from expression data

por Rosenski, Jonathan, Shifman, Sagiv, Kaplan, Tommy
Publicado 2023

A Novel Bayesian DNA Motif Comparison Method for Clustering and Retrieval

por Habib, Naomi, Kaplan, Tommy, Margalit, Hanah, Friedman, Nir
Publicado 2008

Nucleosome positioning from tiling microarray data

por Yassour, Moran, Kaplan, Tommy, Jaimovich, Ariel, Friedman, Nir
Publicado 2008

Correction: A Novel Bayesian DNA Motif Comparison Method for Clustering and Retrieval

por Habib, Naomi, Kaplan, Tommy, Margalit, Hanah, Friedman, Nir
Publicado 2011

Promoter-enhancer interactions identified from Hi-C data using probabilistic models and hierarchical topological domains

por Ron, Gil, Globerson, Yuval, Moran, Dror, Kaplan, Tommy
Publicado 2017

TAF7L modulates brown adipose tissue formation

por Zhou, Haiying, Wan, Bo, Grubisic, Ivan, Kaplan, Tommy, Tjian, Robert
Publicado 2014

Accurate age prediction from blood using a small set of DNA methylation sites and a cohort-based machine learning algorithm

por Varshavsky, Miri, Harari, Gil, Glaser, Benjamin, Dor, Yuval, Shemer, Ruth, Kaplan, Tommy
Publicado 2023

Roles for H2A.Z and Its Acetylation in GAL1 Transcription and Gene Induction, but Not GAL1-Transcriptional Memory

por Halley, Jeffrey E., Kaplan, Tommy, Wang, Alice Y., Kobor, Michael S., Rine, Jasper
Publicado 2010

Zelda Binding in the Early Drosophila melanogaster Embryo Marks Regions Subsequently Activated at the Maternal-to-Zygotic Transition

por Harrison, Melissa M., Li, Xiao-Yong, Kaplan, Tommy, Botchan, Michael R., Eisen, Michael B.
Publicado 2011

Establishment of regions of genomic activity during the Drosophila maternal to zygotic transition

por Li, Xiao-Yong, Harrison, Melissa M, Villalta, Jacqueline E, Kaplan, Tommy, Eisen, Michael B
Publicado 2014

Functional characterization of the ZEB2 regulatory landscape

por Bar Yaacov, Reut, Eshel, Reut, Farhi, Einan, Shemuluvich, Fania, Kaplan, Tommy, Birnbaum, Ramon Y
Publicado 2019

Extensive Divergence of Transcription Factor Binding in Drosophila Embryos with Highly Conserved Gene Expression

por Paris, Mathilde, Kaplan, Tommy, Li, Xiao Yong, Villalta, Jacqueline E., Lott, Susan E., Eisen, Michael B.
Publicado 2013

A hyperdynamic H3.3 nucleosome marks promoter regions in pluripotent embryonic stem cells

por Schlesinger, Sharon, Kaffe, Binyamin, Melcer, Shai, Aguilera, Jose D., Sivaraman, Divya M., Kaplan, Tommy, Meshorer, Eran
Publicado 2017

Detection of Cell Types Contributing to Cancer From Circulating, Cell-Free Methylated DNA

por Barefoot, Megan E., Loyfer, Netanel, Kiliti, Amber J., McDeed, A. Patrick, Kaplan, Tommy, Wellstein, Anton
Publicado 2021

Single-Nucleosome Mapping of Histone Modifications in S. cerevisiae

por Liu, Chih Long, Kaplan, Tommy, Kim, Minkyu, Buratowski, Stephen, Schreiber, Stuart L, Friedman, Nir, Rando, Oliver J
Publicado 2005

Dual functions of TAF7L in adipocyte differentiation

por Zhou, Haiying, Kaplan, Tommy, Li, Yan, Grubisic, Ivan, Zhang, Zhengjian, Wang, P Jeremy, Eisen, Michael B, Tjian, Robert
Publicado 2013

Reconstructing spatial organizations of chromosomes through manifold learning

por Zhu, Guangxiang, Deng, Wenxuan, Hu, Hailin, Ma, Rui, Zhang, Sai, Yang, Jinglin, Peng, Jian, Kaplan, Tommy, Zeng, Jianyang
Publicado 2018

Quantitative Models of the Mechanisms That Control Genome-Wide Patterns of Transcription Factor Binding during Early Drosophila Development

por Kaplan, Tommy, Li, Xiao-Yong, Sabo, Peter J., Thomas, Sean, Stamatoyannopoulos, John A., Biggin, Mark D., Eisen, Michael B.
Publicado 2011