PROT-ON: A structure-based detection of designer PROTein interface MutatiONs

por Koşaca, Mehdi, Yılmazbilek, İrem, Karaca, Ezgi
Publicado 2023

The Impact of AI-Based Modeling on the Accuracy of Protein Assembly Prediction: Insights from CASP15

por Ozden, Burcu, Kryshtafovych, Andriy, Karaca, Ezgi
Publicado 2023

Modeling the Dynamics of Protein–Protein Interfaces, How and Why?

por Karaca, Ezgi, Prévost, Chantal, Sacquin-Mora, Sophie
Publicado 2022

Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis

por Tozluoğlu, Melda, Karaca, Ezgi, Haliloglu, Turkan, Nussinov, Ruth
Publicado 2008

A Mechanistic View of the Role of E3 in Sumoylation

por Tozluoğlu, Melda, Karaca, Ezgi, Nussinov, Ruth, Haliloğlu, Türkan
Publicado 2010

In Silico Phylogenetic and Structural Analyses of Plant Endogenous Danger Signaling Molecules upon Stress

por Pavlopoulou, Athanasia, Karaca, Ezgi, Balestrazzi, Alma, Georgakilas, Alexandros G.
Publicado 2019

How Far Are We from the Rapid Prediction of Drug Resistance Arising Due to Kinase Mutations?

por Erguven, Mehmet, Karakulak, Tülay, Diril, M. Kasim, Karaca, Ezgi
Publicado 2021

Enzymatic Generation of Double‐Modified AdoMet Analogues and Their Application in Cascade Reactions with Different Methyltransferases

por Erguven, Mehmet, Cornelissen, Nicolas V., Peters, Aileen, Karaca, Ezgi, Rentmeister, Andrea
Publicado 2022

Structural snapshots of Xer recombination reveal activation by synaptic complex remodeling and DNA bending

por Bebel, Aleksandra, Karaca, Ezgi, Kumar, Banushree, Stark, W Marshall, Barabas, Orsolya
Publicado 2016

Predicting the Specificity- Determining Positions of Receptor Tyrosine Kinase Axl

por Karakulak, Tülay, Rifaioglu, Ahmet Sureyya, Rodrigues, João P. G. L. M., Karaca, Ezgi
Publicado 2021

Understanding the Role of the Josephin Domain in the PolyUb Binding and Cleavage Properties of Ataxin-3

por Nicastro, Giuseppe, Todi, Sokol V., Karaca, Ezgi, Bonvin, Alexandre M. J. J., Paulson, Henry L., Pastore, Annalisa
Publicado 2010

Building Macromolecular Assemblies by Information-driven Docking: INTRODUCING THE HADDOCK MULTIBODY DOCKING SERVER

por Karaca, Ezgi, Melquiond, Adrien S. J., de Vries, Sjoerd J., Kastritis, Panagiotis L., Bonvin, Alexandre M. J. J.
Publicado 2010

Differential Occupancy and Regulatory Interactions of KDM6A in Bladder Cell Lines

por Özden-Yılmaz, Gülden, Savas, Busra, Bursalı, Ahmet, Eray, Aleyna, Arıbaş, Alirıza, Senturk, Serif, Karaca, Ezgi, Karakülah, Gökhan, Erkek-Ozhan, Serap
Publicado 2023

More Favorable Palmitic Acid Over Palmitoleic Acid Modification of Wnt3 Ensures Its Localization and Activity in Plasma Membrane Domains

por Azbazdar, Yagmur, Ozalp, Ozgun, Sezgin, Erdinc, Veerapathiran, Sapthaswaran, Duncan, Anna L., Sansom, Mark S. P., Eggeling, Christian, Wohland, Thorsten, Karaca, Ezgi, Ozhan, Gunes
Publicado 2019

Transposase-DNA Complex Structures Reveal Mechanisms for Conjugative Transposition of Antibiotic Resistance

por Rubio-Cosials, Anna, Schulz, Eike C., Lambertsen, Lotte, Smyshlyaev, Georgy, Rojas-Cordova, Carlos, Forslund, Kristoffer, Karaca, Ezgi, Bebel, Aleksandra, Bork, Peer, Barabas, Orsolya
Publicado 2018

Molecular Mechanism of Nucleosome Recognition by the Pioneer Transcription Factor Sox

por Ozden, Burcu, Boopathi, Ramachandran, Barlas, Ayşe Berçin, Lone, Imtiaz N., Bednar, Jan, Petosa, Carlo, Kale, Seyit, Hamiche, Ali, Angelov, Dimitar, Dimitrov, Stefan, Karaca, Ezgi
Publicado 2023

VARS1 mutations associated with neurodevelopmental disorder are located on a short amino acid stretch of the anticodon-binding domain

por HIZ, Semra, KILIÇ, Seval, BADEMCİ, Güney, KARAKULAK, Tülay, ERDOĞAN, Aybike, ÖZDEN, Burcu, ERESEN, Çiğdem, ERDAL, Esra, YİŞ, Uluç, TEKİN, Mustafa, KARAKÜLAH, Gökhan, KARACA, Ezgi, ÖZTÜRK, Mehmet
Publicado 2022

Autosomal recessive variants in TUBGCP2 alter the γ-tubulin ring complex leading to neurodevelopmental disease

por Gungor, Serdal, Oktay, Yavuz, Hiz, Semra, Aranguren-Ibáñez, Álvaro, Kalafatcilar, Ipek, Yaramis, Ahmet, Karaca, Ezgi, Yis, Uluc, Sonmezler, Ece, Ekinci, Burcu, Aslan, Mahmut, Yilmaz, Elmasnur, Özgör, Bilge, Balaraju, Sunitha, Szabo, Nora, Laurie, Steven, Beltran, Sergi, MacArthur, Daniel G., Hathazi, Denisa, Töpf, Ana, Roos, Andreas, Lochmuller, Hanns, Vernos, Isabelle, Horvath, Rita
Publicado 2020

Rapid and efficient ambient temperature X-ray crystal structure determination at Turkish Light Source

por Gul, Mehmet, Ayan, Esra, Destan, Ebru, Johnson, J. Austin, Shafiei, Alaleh, Kepceoğlu, Abdullah, Yilmaz, Merve, Ertem, Fatma Betül, Yapici, İlkin, Tosun, Bilge, Baldir, Nilüfer, Tokay, Nurettin, Nergiz, Zeliş, Karakadioğlu, Gözde, Paydos, Seyide Seda, Kulakman, Cahine, Ferah, Cengiz Kaan, Güven, Ömür, Atalay, Necati, Akcan, Enver Kamil, Cetinok, Haluk, Arslan, Nazlı Eylül, Şabanoğlu, Kardelen, Aşci, Bengisu, Tavli, Serra, Gümüsboğa, Helin, Altuntaş, Sevde, Otsuka, Masami, Fujita, Mikako, Teki̇n, Şaban, Çi̇ftçi̇, Halilibrahim, Durdaği, Serdar, Karaca, Ezgi, Kaplan Türköz, Burcu, Kabasakal, Burak Veli, Kati, Ahmet, DeMi̇rci̇, Hasan
Publicado 2023

Cryogenic X-ray crystallographic studies of biomacromolecules at Turkish Light Source “Turkish DeLight”

por ATALAY, Necati, AKCAN, Enver Kamil, GÜL, Mehmet, AYAN, Esra, DESTAN, Ebru, ERTEM, Fatma Betül, TOKAY, Nurettin, ÇAKILKAYA, Barış, NERGİZ, Zeliş, KARAKADIOĞLU, Gözde, KEPCEOĞLU, Abdullah, YAPICI, İlkin, TOSUN, Bilge, BALDIR, Nilüfer, YILDIRIM, Günseli, JOHNSON, J Austin, GÜVEN, Ömür, SHAFIEI, Alaleh, ARSLAN, Nazlı Eylül, YILMAZ, Merve, KULAKMAN, Cahine, PAYDOS, Seyide Seda, ÇİNAL, Zeynep Sena, ŞABANOĞLU, Kardelen, PAZARÇEVİREN, Ayşegül, YILMAZ, Ayşenur, CANBAY, Başak, AŞCI, Bengisu, KARTAL, Esra, TAVLI, Serra, ÇALISEKİ, Mehmet, GÖÇ, Günce, MERMER, Arif, YEŞİLAY, Gamze, ALTUNTAŞ, Sevde, TATEISHI, Hiroshi, OTSUKA, Masami, FUJITA, Mikako, TEKİN, Şaban, ÇİFTÇİ, Halilibrahim, DURDAĞI, Serdar, DİNLER DOĞANAY, Gizem, KARACA, Ezgi, KAPLAN TÜRKÖZ, Burcu, KABASAKAL, Burak Veli, KATI, Ahmet, DEMİRCİ, Hasan
Publicado 2023