microTrait: A Toolset for a Trait-Based Representation of Microbial Genomes

por Karaoz, Ulas, Brodie, Eoin L.
Publicado 2022

Solid and Suspension Microarrays for Microbial Diagnostics

por Miller, Steve, Karaoz, Ulas, Brodie, Eoin, Dunbar, Sherry
Publicado 2015

Linking soil biology and chemistry in biological soil crust using isolate exometabolomics

por Swenson, Tami L., Karaoz, Ulas, Swenson, Joel M., Bowen, Benjamin P., Northen, Trent R.
Publicado 2018

Metatranscriptomic evidence of pervasive and diverse chemolithoautotrophy relevant to C, S, N and Fe cycling in a shallow alluvial aquifer

por Jewell, Talia N M, Karaoz, Ulas, Brodie, Eoin L, Williams, Kenneth H, Beller, Harry R
Publicado 2016

A novel d-xylose isomerase from the gut of the wood feeding beetle Odontotaenius disjunctus efficiently expressed in Saccharomyces cerevisiae

por Silva, Paulo César, Ceja-Navarro, Javier A., Azevedo, Flávio, Karaoz, Ulas, Brodie, Eoin L., Johansson, Björn
Publicado 2021

Maintenance of Sympatric and Allopatric Populations in Free-Living Terrestrial Bacteria

por Chase, Alexander B., Arevalo, Philip, Brodie, Eoin L., Polz, Martin F., Karaoz, Ulas, Martiny, Jennifer B. H.
Publicado 2019

Virus diversity and activity is driven by snowmelt and host dynamics in a high-altitude watershed soil ecosystem

por Coclet, Clement, Sorensen, Patrick O., Karaoz, Ulas, Wang, Shi, Brodie, Eoin L., Eloe-Fadrosh, Emiley A., Roux, Simon
Publicado 2023

Bacteria increase arid-land soil surface temperature through the production of sunscreens

por Couradeau, Estelle, Karaoz, Ulas, Lim, Hsiao Chien, Nunes da Rocha, Ulisses, Northen, Trent, Brodie, Eoin, Garcia-Pichel, Ferran
Publicado 2016

Microdiversity of an Abundant Terrestrial Bacterium Encompasses Extensive Variation in Ecologically Relevant Traits

por Chase, Alexander B., Karaoz, Ulas, Brodie, Eoin L., Gomez-Lunar, Zulema, Martiny, Adam C., Martiny, Jennifer B. H.
Publicado 2017

Microbial Phosphorus Mobilization Strategies Across a Natural Nutrient Limitation Gradient and Evidence for Linkage With Iron Solubilization Traits

por Wang, Shi, Walker, Robert, Schicklberger, Marcus, Nico, Peter S., Fox, Patricia M., Karaoz, Ulas, Chakraborty, Romy, Brodie, Eoin L.
Publicado 2021

METABOLIC: high-throughput profiling of microbial genomes for functional traits, metabolism, biogeochemistry, and community-scale functional networks

por Zhou, Zhichao, Tran, Patricia Q., Breister, Adam M., Liu, Yang, Kieft, Kristopher, Cowley, Elise S., Karaoz, Ulas, Anantharaman, Karthik
Publicado 2022

Metatranscriptomic Analysis Reveals Unexpectedly Diverse Microbial Metabolism in a Biogeochemical Hot Spot in an Alluvial Aquifer

por Jewell, Talia N. M., Karaoz, Ulas, Bill, Markus, Chakraborty, Romy, Brodie, Eoin L., Williams, Kenneth H., Beller, Harry R.
Publicado 2017

Large Blooms of Bacillales (Firmicutes) Underlie the Response to Wetting of Cyanobacterial Biocrusts at Various Stages of Maturity

por Karaoz, Ulas, Couradeau, Estelle, da Rocha, Ulisses Nunes, Lim, Hsiao-Chien, Northen, Trent, Garcia-Pichel, Ferran, Brodie, Eoin L.
Publicado 2018

Coupled high-throughput functional screening and next generation sequencing for identification of plant polymer decomposing enzymes in metagenomic libraries

por Nyyssönen, Mari, Tran, Huu M., Karaoz, Ulas, Weihe, Claudia, Hadi, Masood Z., Martiny, Jennifer B. H., Martiny, Adam C., Brodie, Eoin L.
Publicado 2013

Use of 16S rRNA Gene for Identification of a Broad Range of Clinically Relevant Bacterial Pathogens

por Srinivasan, Ramya, Karaoz, Ulas, Volegova, Marina, MacKichan, Joanna, Kato-Maeda, Midori, Miller, Steve, Nadarajan, Rohan, Brodie, Eoin L., Lynch, Susan V.
Publicado 2015

Differential Growth Responses of Soil Bacterial Taxa to Carbon Substrates of Varying Chemical Recalcitrance

por Goldfarb, Katherine C., Karaoz, Ulas, Hanson, China A., Santee, Clark A., Bradford, Mark A., Treseder, Kathleen K., Wallenstein, Matthew D., Brodie, Eoin L.
Publicado 2011

Metagenomics reveals niche partitioning within the phototrophic zone of a microbial mat

por Lee, Jackson Z., Everroad, R. Craig, Karaoz, Ulas, Detweiler, Angela M., Pett-Ridge, Jennifer, Weber, Peter K., Prufert-Bebout, Leslie, Bebout, Brad M.
Publicado 2018

Simrank: Rapid and sensitive general-purpose k-mer search tool

por DeSantis, Todd Z, Keller, Keith, Karaoz, Ulas, Alekseyenko, Alexander V, Singh, Navjeet NS, Brodie, Eoin L, Pei, Zhiheng, Andersen, Gary L, Larsen, Niels
Publicado 2011

Publisher Correction: Gut microbiota mediate caffeine detoxification in the primary insect pest of coffee

por Ceja-Navarro, Javier A., Vega, Fernando E., Karaoz, Ulas, Hao, Zhao, Jenkins, Stefan, Lim, Hsiao Chien, Kosina, Petr, Infante, Francisco, Northen, Trent R., Brodie, Eoin L.
Publicado 2023

Gut microbiota mediate caffeine detoxification in the primary insect pest of coffee

por Ceja-Navarro, Javier A., Vega, Fernando E., Karaoz, Ulas, Hao, Zhao, Jenkins, Stefan, Lim, Hsiao Chien, Kosina, Petr, Infante, Francisco, Northen, Trent R., Brodie, Eoin L.
Publicado 2015