CoryneRegNet 7, the reference database and analysis platform for corynebacterial gene regulatory networks

por Parise, Mariana Teixeira Dornelles, Parise, Doglas, Kato, Rodrigo Bentes, Pauling, Josch Konstantin, Tauch, Andreas, Azevedo, Vasco Ariston de Carvalho, Baumbach, Jan
Publicado 2020

On the Consistency between Gene Expression and the Gene Regulatory Network of Corynebacterium glutamicum

por Parise, Doglas, Parise, Mariana Teixeira Dornelles, Kataka, Evans, Kato, Rodrigo Bentes, List, Markus, Tauch, Andreas, Azevedo, Vasco Ariston de Carvalho, Baumbach, Jan
Publicado 2021

Interactions between DC-SIGN and the envelope protein from Dengue and Zika viruses: a structural perspective based on molecular dynamics and MM/GBSA analyses

por Menechino, Bruno Stein Barbosa, Kato, Rodrigo Bentes, Franz, Helena Cristina Ferreira, da Silva, Pedro Eduardo Almeida, Corat, Marcus, de Lima Neto, Daniel Ferreira
Publicado 2023

An Integrated Database of Small RNAs and Their Interplay With Transcriptional Gene Regulatory Networks in Corynebacteria

por Parise, Mariana Teixeira Dornelles, Parise, Doglas, Aburjaile, Flavia Figueira, Pinto Gomide, Anne Cybelle, Kato, Rodrigo Bentes, Raden, Martin, Backofen, Rolf, Azevedo, Vasco Ariston de Carvalho, Baumbach, Jan
Publicado 2021

The Transcriptional Regulatory Network of Corynebacterium pseudotuberculosis

por Parise, Doglas, Teixeira Dornelles Parise, Mariana, Pinto Gomide, Anne Cybelle, Figueira Aburjaile, Flávia, Bentes Kato, Rodrigo, Salgado-Albarrán, Marisol, Tauch, Andreas, Ariston de Carvalho Azevedo, Vasco, Baumbach, Jan
Publicado 2021

In Silico Designed Multi-Epitope Immunogen “Tpme-VAC/LGCM-2022” May Induce Both Cellular and Humoral Immunity against Treponema pallidum Infection

por Gomes, Lucas Gabriel Rodrigues, Rodrigues, Thaís Cristina Vilela, Jaiswal, Arun Kumar, Santos, Roselane Gonçalves, Kato, Rodrigo Bentes, Barh, Debmalya, Alzahrani, Khalid J., Banjer, Hamsa Jameel, Soares, Siomar de Castro, Azevedo, Vasco, Tiwari, Sandeep
Publicado 2022

Characterization of the first vaginal Lactobacillus crispatus genomes isolated in Brazil

por Oliveira de Almeida, Marcelle, Carvalho, Rodrigo, Figueira Aburjaile, Flavia, Malcher Miranda, Fabio, Canário Cerqueira, Janaína, Brenig, Bertram, Ghosh, Preetam, Ramos, Rommel, Kato, Rodrigo Bentes, de Castro Soares, Siomar, Silva, Artur, Azevedo, Vasco, Canário Viana, Marcus Vinicius
Publicado 2021

Immunoinformatics Design of Multi-Epitope Peptide-Based Vaccine Against Schistosoma mansoni Using Transmembrane Proteins as a Target

por Sanches, Rodrigo C. O., Tiwari, Sandeep, Ferreira, Laís C. G., Oliveira, Flávio M., Lopes, Marcelo D., Passos, Maria J. F., Maia, Eduardo H. B., Taranto, Alex G., Kato, Rodrigo, Azevedo, Vasco A. C., Lopes, Debora O.
Publicado 2021

Foliar mycoendophytome of an endemic plant of the Mediterranean biome (Myrtus communis) reveals the dominance of basidiomycete woody saprotrophs

por Vaz, Aline Bruna M., Fonseca, Paula Luize C., Silva, Felipe F., Quintanilha-Peixoto, Gabriel, Sampedro, Inmaculada, Siles, Jose A., Carmo, Anderson, Kato, Rodrigo B., Azevedo, Vasco, Badotti, Fernanda, Ocampo, Juan A., Rosa, Carlos A., Góes-Neto, Aristóteles
Publicado 2020

Bacteriocin Producing Streptococcus agalactiae Strains Isolated from Bovine Mastitis in Brazil

por Vidal Amaral, João Ricardo, Jucá Ramos, Rommel Thiago, Almeida Araújo, Fabrício, Bentes Kato, Rodrigo, Figueira Aburjaile, Flávia, de Castro Soares, Siomar, Góes-Neto, Aristóteles, Matiuzzi da Costa, Mateus, Azevedo, Vasco, Brenig, Bertram, Soares de Oliveira, Selma, Soares Rosado, Alexandre
Publicado 2022

Unraveling the Genomic Potential of the Thermophilic Bacterium Anoxybacillus flavithermus from an Antarctic Geothermal Environment

por Schultz, Júnia, Parise, Mariana Teixeira Dornelles, Parise, Doglas, Medeiros, Laenne G., Sousa, Thiago J., Kato, Rodrigo B., Uetanabaro, Ana Paula Trovatti, Araújo, Fabrício, Ramos, Rommel Thiago Jucá, de Castro Soares, Siomar, Brenig, Bertram, de Carvalho Azevedo, Vasco Ariston, Góes-Neto, Aristóteles, Rosado, Alexandre S.
Publicado 2022

Draft genome sequence of Trametes villosa (Sw.) Kreisel CCMB561, a tropical white-rot Basidiomycota from the semiarid region of Brazil

por Ferreira, Dalila Souza Santos, Kato, Rodrigo Bentes, Miranda, Fábio Malcher, da Costa Pinheiro, Kenny, Fonseca, Paula Luize Camargos, Tomé, Luiz Marcelo Ribeiro, Vaz, Aline Bruna Martins, Badotti, Fernanda, Ramos, Rommel Thiago Jucá, Brenig, Bertram, Azevedo, Vasco Ariston de Carvalho, Benevides, Raquel Guimarães, Góes-Neto, Aristóteles
Publicado 2018

Re-sequencing and optical mapping reveals misassemblies and real inversions on Corynebacterium pseudotuberculosis genomes

por Sousa, Thiago de Jesus, Parise, Doglas, Profeta, Rodrigo, Parise, Mariana Teixeira Dornelles, Gomide, Anne Cybelle Pinto, Kato, Rodrigo Bentos, Pereira, Felipe Luiz, Figueiredo, Henrique Cesar Pereira, Ramos, Rommel, Brenig, Bertram, Costa da Silva, Artur Luiz da, Ghosh, Preetam, Barh, Debmalya, Góes-Neto, Aristóteles, Azevedo, Vasco
Publicado 2019

Putting the Mess in Order: Aspergillus welwitschiae (and Not A. niger) Is the Etiological Agent of Sisal Bole Rot Disease in Brazil

por Duarte, Elizabeth A. A., Damasceno, Caroline L., de Oliveira, Thiago A. S., Barbosa, Leonardo de Oliveira, Martins, Fabiano M., de Queiroz Silva, Jurema Rosa, de Lima, Thais E. F., da Silva, Rafael M., Kato, Rodrigo B., Bortolini, Dener E., Azevedo, Vasco, Góes-Neto, Aristóteles, Soares, Ana C. F.
Publicado 2018

Unveiling Fungal Community Structure along Different Levels of Anthropic Disturbance in a South American Subtropical Lagoon

por Pagani, Danielle Machado, Ventura, Stefânia P. R., Vu, Duong, Mendes-Pereira, Thairine, Ribeiro Tomé, Luiz Marcelo, de Carvalho, Daniel Santana, Costa-Rezende, Diogo Henrique, Kato, Rodrigo Bentes, García, Glen Jasper Yupanqui, Geml, József, Robert, Vincent, They, Ng Haig, Brenig, Bertram, Azevedo, Vasco, Scroferneker, Maria Lúcia, Valente, Patricia, Góes-Neto, Aristóteles
Publicado 2023

Unraveling the Secrets of a Double-Life Fungus by Genomics: Ophiocordyceps australis CCMB661 Displays Molecular Machinery for Both Parasitic and Endophytic Lifestyles

por de Menezes, Thaís Almeida, Aburjaile, Flávia Figueira, Quintanilha-Peixoto, Gabriel, Tomé, Luiz Marcelo Ribeiro, Fonseca, Paula Luize Camargos, Mendes-Pereira, Thairine, Araújo, Daniel Silva, Melo, Tarcisio Silva, Kato, Rodrigo Bentes, Delabie, Jacques Hubert Charles, Ribeiro, Sérvio Pontes, Brenig, Bertram, Azevedo, Vasco, Drechsler-Santos, Elisandro Ricardo, Andrade, Bruno Silva, Góes-Neto, Aristóteles
Publicado 2023

Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locu...

por Profeta, Rodrigo, Seyffert, Núbia, Tiwari, Sandeep, Viana, Marcus V.C., Jaiswal, Arun Kumar, Caetano, Ana Carolina, Bücker, Daniel Henrique, de Oliveira, Luciana Tavares, Santos, Roselane, Gala-Garcia, Alfonso, Kato, Rodrigo B., Padilha, Francine F., Lima-Verde, Isabel B., Ghosh, Preetam, Barh, Debmalya, Góes-Neto, Aristóteles, Figueiredo, Henrique C.P., Soares, Siomar C., Meyer, Roberto, Brenig, Bertram, Ramos, Pablo I.P., Azevedo, Vasco, Castro, Thiago L.P.
Publicado 2021

An Integrative View of the Phyllosphere Mycobiome of Native Rubber Trees in the Brazilian Amazon

por Fonseca, Paula Luize Camargos, Skaltsas, Demetra, da Silva, Felipe Ferreira, Kato, Rodrigo Bentes, de Castro, Giovanni Marques, García, Glen Jasper Yupanqui, Quintanilha-Peixoto, Gabriel, Mendes-Pereira, Thairine, do Carmo, Anderson Oliveira, Aguiar, Eric Roberto Guimarães Rocha, de Carvalho, Daniel Santana, Costa-Rezende, Diogo Henrique, Drechsler-Santos, Elisandro Ricardo, Badotti, Fernanda, Ferreira-Silva, Alice, Oliveira, Guilherme, Chaverri, Priscila, Vaz, Aline Bruna Martins, Góes-Neto, Aristóteles
Publicado 2022

The Space-Exposed Kombucha Microbial Community Member Komagataeibacter oboediens Showed Only Minor Changes in Its Genome After Reactivation on Earth

por Santana de Carvalho, Daniel, Trovatti Uetanabaro, Ana Paula, Kato, Rodrigo Bentes, Aburjaile, Flávia Figueira, Jaiswal, Arun Kumar, Profeta, Rodrigo, De Oliveira Carvalho, Rodrigo Dias, Tiwar, Sandeep, Cybelle Pinto Gomide, Anne, Almeida Costa, Eduardo, Kukharenko, Olga, Orlovska, Iryna, Podolich, Olga, Reva, Oleg, Ramos, Pablo Ivan P., De Carvalho Azevedo, Vasco Ariston, Brenig, Bertram, Andrade, Bruno Silva, de Vera, Jean-Pierre P., Kozyrovska, Natalia O., Barh, Debmalya, Góes-Neto, Aristóteles
Publicado 2022

Genomic evidence of SARS-CoV-2 reinfection case with the emerging B.1.2 variant in Brazil

por Fonseca, Vagner, de Jesus, Ronaldo, Adelino, Talita, Reis, Alexandre Barbosa, de Souza, Breno Bernardes, Ribeiro, Adriana Aparecida, Guimarães, Natália Rocha, Livorati, Miriam Teresinha Furlam Prado, Neto, Daniel Ferreira de Lima, Kato, Rodrigo Bentes, Portela, Layssa Miranda de Oliveira, Dutra, Leonardo Hermes, Freitas, Carla, de Abreu, André Luiz, Filizzola, Eduardo Regis Melo, de Medeiros, Arnaldo Correia, Iani, Felipe Campos de Melo, Carvalho, Glauco, Lourenço, José, de Oliveira, Tulio, Alcantara, Luiz Carlos Junior, Giovanetti, Marta
Publicado 2021