Challenges in proteogenomics: a comparison of analysis methods with the case study of the DREAM proteogenomics sub-challenge

por Eicher, Tara, Patt, Andrew, Kautto, Esko, Machiraju, Raghu, Mathé, Ewy, Zhang, Yan
Publicado 2019

Performance evaluation for rapid detection of pan-cancer microsatellite instability with MANTIS

por Kautto, Esko A., Bonneville, Russell, Miya, Jharna, Yu, Lianbo, Krook, Melanie A., Reeser, Julie W., Roychowdhury, Sameek
Publicado 2016

Characterization and mitigation of fragmentation enzyme-induced dual stranded artifacts

por Gregory, Thomas, Ngankeu, Apollinaire, Orwick, Shelley, Kautto, Esko A, Woyach, Jennifer A, Byrd, John C, Blachly, James S
Publicado 2020

Expanding the clinical phenotype of FGFR1 internal tandem duplication

por Kautto, Esko A., Schieffer, Kathleen M., McGrath, Sean, Miller, Anthony R., Hernandez-Gonzalez, Maria Elena, Choi, Samantha, Conces, Miriam R., Fernandez-Faith, Esteban, Ho, Mai-Lan, Lee, Kristy, Lillis, Anna P., Pearson, Gregory D., Kaler, Stephen G., Wilson, Richard K., Mardis, Elaine R., Magrini, Vincent, Leonard, Jeffrey, Cottrell, Catherine E.
Publicado 2022

Molecular classification of a complex structural rearrangement of the RB1 locus in an infant with sporadic, isolated, intracranial, sellar region retinoblastoma

por Schieffer, Kathleen M., Feldman, Alexander Z., Kautto, Esko A., McGrath, Sean, Miller, Anthony R., Hernandez-Gonzalez, Maria Elena, LaHaye, Stephanie, Miller, Katherine E., Koboldt, Daniel C., Brennan, Patrick, Kelly, Benjamin, Wetzel, Amy, Agarwal, Vibhuti, Shatara, Margaret, Conley, Suzanne, Rodriguez, Diana P., Abu-Arja, Rolla, Shaikhkhalil, Ala, Snuderl, Matija, Orr, Brent A., Finlay, Jonathan L., Osorio, Diana S., Drapeau, Annie I., Leonard, Jeffrey R., Pierson, Christopher R., White, Peter, Magrini, Vincent, Mardis, Elaine R., Wilson, Richard K., Cottrell, Catherine E., Boué, Daniel R.
Publicado 2021