Recovery of a Medieval Brucella melitensis Genome Using Shotgun Metagenomics

por Kay, Gemma L., Sergeant, Martin J., Giuffra, Valentina, Bandiera, Pasquale, Milanese, Marco, Bramanti, Barbara, Bianucci, Raffaella, Pallen, Mark J.
Publicado 2014

Differences in the Faecal Microbiome in Schistosoma haematobium Infected Children vs. Uninfected Children

por Kay, Gemma Louise, Millard, Andrew, Sergeant, Martin J., Midzi, Nicholas, Gwisai, Reggis, Mduluza, Takafira, Ivens, Alasdair, Nausch, Norman, Mutapi, Francisca, Pallen, Mark
Publicado 2015

Draft Genome Sequences of Six Novel Bacterial Isolates from Chicken Ceca

por Duggett, Nicholas A., Kay, Gemma L., Sergeant, Martin J., Bedford, Michael, Constantinidou, Chrystala I., Penn, Charles W., Millard, Andrew D., Pallen, Mark J.
Publicado 2016

An In Vitro Chicken Gut Model Demonstrates Transfer of a Multidrug Resistance Plasmid from Salmonella to Commensal Escherichia coli

por Card, Roderick M., Cawthraw, Shaun A., Nunez-Garcia, Javier, Ellis, Richard J., Kay, Gemma, Pallen, Mark J., Woodward, Martin J., Anjum, Muna F.
Publicado 2017

Whole-Genome Sequencing of Brachyspira hyodysenteriae Isolates From England and Wales Reveals Similarities to European Isolates and Mutations Associated With Reduced Sensitivity to...

por Stubberfield, Emma, Sheldon, Jonathan, Card, Roderick M., AbuOun, Manal, Rogers, Jon, Williamson, Susanna, Kay, Gemma L., Pallen, Mark J., Anjum, Muna F.
Publicado 2021

Identification and characterisation of enteroaggregative Escherichia coli subtypes associated with human disease

por Ellis, Samuel J., Crossman, Lisa C., McGrath, Conor J., Chattaway, Marie A., Hölken, Johanna M., Brett, Bernard, Bundy, Leah, Kay, Gemma L., Wain, John, Schüller, Stephanie
Publicado 2020

Genomic diversity of Escherichia coli isolates from non-human primates in the Gambia

por Foster-Nyarko, Ebenezer, Alikhan, Nabil-Fareed, Ravi, Anuradha, Thilliez, Gaëtan, Thomson, Nicholas M., Baker, David, Kay, Gemma, Cramer, Jennifer D., O’Grady, Justin, Antonio, Martin, Pallen, Mark J.
Publicado 2020

Identification of the anti‐mycobacterial functional properties of piperidinol derivatives

por Guy, Collette S, Tichauer, Esther, Kay, Gemma L, Phillips, Daniel J, Bailey, Trisha L, Harrison, James, Furze, Christopher M, Millard, Andrew D, Gibson, Matthew I, Pallen, Mark J, Fullam, Elizabeth
Publicado 2017

Preliminary evaluation of a rapid lateral flow calprotectin test for the diagnosis of prosthetic joint infection

por Trotter, Alexander J., Dean, Rachael, Whitehouse, Celia E., Mikalsen, Jarle, Hill, Claire, Brunton-Sim, Roxanne, Kay, Gemma L., Shakokani, Majeed, Durst, Alexander Z. E., Wain, John, McNamara, Iain, O’Grady, Justin
Publicado 2020

Eighteenth-century genomes show that mixed infections were common at time of peak tuberculosis in Europe

por Kay, Gemma L., Sergeant, Martin J., Zhou, Zhemin, Chan, Jacqueline Z.-M., Millard, Andrew, Quick, Joshua, Szikossy, Ildikó, Pap, Ildikó, Spigelman, Mark, Loman, Nicholas J., Achtman, Mark, Donoghue, Helen D., Pallen, Mark J.
Publicado 2015

Whole-genome sequencing illuminates the evolution and spread of multidrug-resistant tuberculosis in Southwest Nigeria

por Senghore, Madikay, Otu, Jacob, Witney, Adam, Gehre, Florian, Doughty, Emma L., Kay, Gemma L., Butcher, Phillip, Salako, Kayode, Kehinde, Aderemi, Onyejepu, Nneka, Idigbe, Emmanuel, Corrah, Tumani, de Jong, Bouke, Pallen, Mark J., Antonio, Martin
Publicado 2017

The pathophysiology of bile acid diarrhoea: differences in the colonic microbiome, metabolome and bile acids

por Sagar, Nidhi M., Duboc, Henri, Kay, Gemma L., Alam, Mohammad T., Wicaksono, Alfian N., Covington, James A., Quince, Christopher, Kokkorou, Margarita, Svolos, Vaios, Palmieri, Lola J., Gerasimidis, Konstantinos, Walters, Julian R. F., Arasaradnam, Ramesh P.
Publicado 2020

Metagenomics and microscope revealed T. trichiura and other intestinal parasites in a cesspit of an Italian nineteenth century aristocratic palace

por Chessa, Daniela, Murgia, Manuela, Sias, Emanuela, Deligios, Massimo, Mazzarello, Vittorio, Fiamma, Maura, Rovina, Daniela, Carenti, Gabriele, Ganau, Giulia, Pintore, Elisabetta, Fiori, Mauro, Kay, Gemma L., Ponzeletti, Alessandro, Cappuccinelli, Piero, Kelvin, David J., Wain, John, Rubino, Salvatore
Publicado 2020

Hybrid metagenome assemblies link carbohydrate structure with function in the human gut microbiome

por Ravi, Anuradha, Troncoso-Rey, Perla, Ahn-Jarvis, Jennifer, Corbin, Kendall R., Harris, Suzanne, Harris, Hannah, Aydin, Alp, Kay, Gemma L., Le Viet, Thanh, Gilroy, Rachel, Pallen, Mark J., Page, Andrew J., O’Grady, Justin, Warren, Frederick J.
Publicado 2022

Evolution of Mycobacterium tuberculosis complex lineages and their role in an emerging threat of multidrug resistant tuberculosis in Bamako, Mali

por Senghore, Madikay, Diarra, Bassirou, Gehre, Florian, Otu, Jacob, Worwui, Archibald, Muhammad, Abdul Khalie, Kwambana-Adams, Brenda, Kay, Gemma L., Sanogo, Moumine, Baya, Bocar, Orsega, Susan, Doumbia, Seydou, Diallo, Souleymane, de Jong, Bouke C., Pallen, Mark J., Antonio, Martin
Publicado 2020

Metallohelices that kill Gram-negative pathogens using intracellular antimicrobial peptide pathways

por Simpson, Daniel H., Hapeshi, Alexia, Rogers, Nicola J., Brabec, Viktor, Clarkson, Guy J., Fox, David J., Hrabina, Ondrej, Kay, Gemma L., King, Andrew K., Malina, Jaroslav, Millard, Andrew D., Moat, John, Roper, David I., Song, Hualong, Waterfield, Nicholas R., Scott, Peter
Publicado 2019

SARS-CoV-2 variants of concern dominate in Lahore, Pakistan in April 2021

por Sarwar, Muhammad Bilal, Yasir, Muhammad, Alikhan, Nabil-Fareed, Afzal, Nadeem, de Oliveira Martins, Leonardo, Le Viet, Thanh, Trotter, Alexander J., Prosolek, Sophie J., Kay, Gemma L., Foster-Nyarko, Ebenezer, Rudder, Steven, Baker, David J., Muntaha, Sidra Tul, Roman, Muhammad, Webber, Mark A., Shafiq, Almina, Shabbir, Bilquis, Akram, Javed, Page, Andrew J., Jahan, Shah
Publicado 2021

An outbreak of pneumococcal meningitis among older children (≥5 years) and adults after the implementation of an infant vaccination programme with the 13-valent pneumococcal conjug...

por Kwambana-Adams, Brenda Anna, Asiedu-Bekoe, Franklin, Sarkodie, Badu, Afreh, Osei Kuffour, Kuma, George Khumalo, Owusu-Okyere, Godfred, Foster-Nyarko, Ebenezer, Ohene, Sally-Ann, Okot, Charles, Worwui, Archibald Kwame, Okoi, Catherine, Senghore, Madikay, Otu, Jacob Kweku, Ebruke, Chinelo, Bannerman, Richard, Amponsa-Achiano, Kwame, Opare, David, Kay, Gemma, Letsa, Timothy, Kaluwa, Owen, Appiah-Denkyira, Ebenezer, Bampoe, Victor, Zaman, Syed M. A., Pallen, Mark J., D’Alessandro, Umberto, Mwenda, Jason M., Antonio, Martin
Publicado 2016

CoronaHiT: high-throughput sequencing of SARS-CoV-2 genomes

por Baker, Dave J., Aydin, Alp, Le-Viet, Thanh, Kay, Gemma L., Rudder, Steven, de Oliveira Martins, Leonardo, Tedim, Ana P., Kolyva, Anastasia, Diaz, Maria, Alikhan, Nabil-Fareed, Meadows, Lizzie, Bell, Andrew, Gutierrez, Ana Victoria, Trotter, Alexander J., Thomson, Nicholas M., Gilroy, Rachel, Griffith, Luke, Adriaenssens, Evelien M., Stanley, Rachael, Charles, Ian G., Elumogo, Ngozi, Wain, John, Prakash, Reenesh, Meader, Emma, Mather, Alison E., Webber, Mark A., Dervisevic, Samir, Page, Andrew J., O’Grady, Justin
Publicado 2021

An inter-laboratory study to investigate the impact of the bioinformatics component on microbiome analysis using mock communities

por O’Sullivan, Denise M., Doyle, Ronan M., Temisak, Sasithon, Redshaw, Nicholas, Whale, Alexandra S., Logan, Grace, Huang, Jiabin, Fischer, Nicole, Amos, Gregory C. A., Preston, Mark D., Marchesi, Julian R., Wagner, Josef, Parkhill, Julian, Motro, Yair, Denise, Hubert, Finn, Robert D., Harris, Kathryn A., Kay, Gemma L., O’Grady, Justin, Ransom-Jones, Emma, Wu, Huihai, Laing, Emma, Studholme, David J., Benavente, Ernest Diez, Phelan, Jody, Clark, Taane G., Moran-Gilad, Jacob, Huggett, Jim F.
Publicado 2021