Managing genomic variant calling workflows with Swift/T

por Ahmed, Azza E., Heldenbrand, Jacob, Asmann, Yan, Fadlelmola, Faisal M., Katz, Daniel S., Kendig, Katherine, Kendzior, Matthew C., Li, Tiffany, Ren, Yingxue, Rodriguez, Elliott, Weber, Matthew R., Wozniak, Justin M., Zermeno, Jennie, Mainzer, Liudmila S.
Publicado 2019

Recommendations for performance optimizations when using GATK3.8 and GATK4

por Heldenbrand, Jacob R, Baheti, Saurabh, Bockol, Matthew A, Drucker, Travis M, Hart, Steven N, Hudson, Matthew E, Iyer, Ravishankar K, Kalmbach, Michael T, Kendig, Katherine I, Klee, Eric W, Mattson, Nathan R, Wieben, Eric D, Wiepert, Mathieu, Wildman, Derek E, Mainzer, Liudmila S
Publicado 2019

Correction to: Recommendations for performance optimizations when using GATK3.8 and GATK4

por Heldenbrand, Jacob R., Baheti, Saurabh, Bockol, Matthew A., Drucker, Travis M., Hart, Steven N., Hudson, Matthew E., Iyer, Ravishankar K., Kalmbach, Michael T., Kendig, Katherine I., Klee, Eric W., Mattson, Nathan R., Wieben, Eric D., Wiepert, Mathieu, Wildman, Derek E., Mainzer, Liudmila S.
Publicado 2019

Sentieon DNASeq Variant Calling Workflow Demonstrates Strong Computational Performance and Accuracy

por Kendig, Katherine I., Baheti, Saurabh, Bockol, Matthew A., Drucker, Travis M., Hart, Steven N., Heldenbrand, Jacob R., Hernaez, Mikel, Hudson, Matthew E., Kalmbach, Michael T., Klee, Eric W., Mattson, Nathan R., Ross, Christian A., Taschuk, Morgan, Wieben, Eric D., Wiepert, Mathieu, Wildman, Derek E., Mainzer, Liudmila S.
Publicado 2019

Design considerations for workflow management systems use in production genomics research and the clinic

por Ahmed, Azza E., Allen, Joshua M., Bhat, Tajesvi, Burra, Prakruthi, Fliege, Christina E., Hart, Steven N., Heldenbrand, Jacob R., Hudson, Matthew E., Istanto, Dave Deandre, Kalmbach, Michael T., Kapraun, Gregory D., Kendig, Katherine I., Kendzior, Matthew Charles, Klee, Eric W., Mattson, Nate, Ross, Christian A., Sharif, Sami M., Venkatakrishnan, Ramshankar, Fadlelmola, Faisal M., Mainzer, Liudmila S.
Publicado 2021