A cell-centered, agent-based framework that enables flexible environment granularities

por Kennedy, Ryan C, Ropella, Glen EP, Hunt, C Anthony
Publicado 2016

Simulation enabled search for explanatory mechanisms of the fracture healing process

por Kennedy, Ryan C., Marmor, Meir, Marcucio, Ralph, Hunt, C. Anthony
Publicado 2018

An automated homology-based approach for identifying transposable elements

por Kennedy, Ryan C, Unger, Maria F, Christley, Scott, Collins, Frank H, Madey, Gregory R
Publicado 2011

Agent-based modeling: a systematic assessment of use cases and requirements for enhancing pharmaceutical research and development productivity

por Hunt, C Anthony, Kennedy, Ryan C, Kim, Sean H J, Ropella, Glen E P
Publicado 2013

Utilizing virtual experiments to increase understanding of discrepancies involving in vitro-to-in vivo predictions of hepatic clearance

por Krishnan, Preethi, Smith, Andrew K., Ropella, Glen E. P., Dutta, Lopamudra, Kennedy, Ryan C., Hunt, C. Anthony
Publicado 2022

A test of agent-based models as a tool for predicting patterns of pathogen transmission in complex landscapes

por Lane-deGraaf, Kelly E, Kennedy, Ryan C, Arifin, SM Niaz, Madey, Gregory R, Fuentes, Agustin, Hollocher, Hope
Publicado 2013

Propagation of Pericentral Necrosis During Acetaminophen-Induced Liver Injury: Evidence for Early Interhepatocyte Communication and Information Exchange

por Kennedy, Ryan C, Smith, Andrew K, Ropella, Glen E P, McGill, Mitchell R, Jaeschke, Hartmut, Hunt, C Anthony
Publicado 2019

Competing Mechanistic Hypotheses of Acetaminophen-Induced Hepatotoxicity Challenged by Virtual Experiments

por Smith, Andrew K., Petersen, Brenden K., Ropella, Glen E. P., Kennedy, Ryan C., Kaplowitz, Neil, Ookhtens, Murad, Hunt, C. Anthony
Publicado 2016

Contrasting model mechanisms of alanine aminotransferase (ALT) release from damaged and necrotic hepatocytes as an example of general biomarker mechanisms

por Smith, Andrew K., Ropella, Glen E. P., McGill, Mitchell R., Krishnan, Preethi, Dutta, Lopamudra, Kennedy, Ryan C., Jaeschke, Hartmut, Hunt, C. Anthony
Publicado 2020

VectorBase: a home for invertebrate vectors of human pathogens

por Lawson, Daniel, Arensburger, Peter, Atkinson, Peter, Besansky, Nora J., Bruggner, Robert V., Butler, Ryan, Campbell, Kathryn S., Christophides, George K., Christley, Scott, Dialynas, Emmanuel, Emmert, David, Hammond, Martin, Hill, Catherine A., Kennedy, Ryan C., Lobo, Neil F., MacCallum, M. Robert, Madey, Greg, Megy, Karine, Redmond, Seth, Russo, Susan, Severson, David W., Stinson, Eric O., Topalis, Pantelis, Zdobnov, Evgeny M., Birney, Ewan, Gelbart, William M., Kafatos, Fotis C., Louis, Christos, Collins, Frank H.
Publicado 2007

Genome analysis of a major urban malaria vector mosquito, Anopheles stephensi

por Jiang, Xiaofang, Peery, Ashley, Hall, A Brantley, Sharma, Atashi, Chen, Xiao-Guang, Waterhouse, Robert M, Komissarov, Aleksey, Riehle, Michelle M, Shouche, Yogesh, Sharakhova, Maria V, Lawson, Dan, Pakpour, Nazzy, Arensburger, Peter, Davidson, Victoria L M, Eiglmeier, Karin, Emrich, Scott, George, Phillip, Kennedy, Ryan C, Mane, Shrinivasrao P, Maslen, Gareth, Oringanje, Chioma, Qi, Yumin, Settlage, Robert, Tojo, Marta, Tubio, Jose M C, Unger, Maria F, Wang, Bo, Vernick, Kenneth D, Ribeiro, Jose M C, James, Anthony A, Michel, Kristin, Riehle, Michael A, Luckhart, Shirley, Sharakhov, Igor V, Tu, Zhijian
Publicado 2014

Genomic analysis of two phlebotomine sand fly vectors of Leishmania from the New and Old World

por Labbé, Frédéric, Abdeladhim, Maha, Abrudan, Jenica, Araki, Alejandra Saori, Araujo, Ricardo N., Arensburger, Peter, Benoit, Joshua B., Brazil, Reginaldo Pecanha, Bruno, Rafaela V., Bueno da Silva Rivas, Gustavo, Carvalho de Abreu, Vinicius, Charamis, Jason, Coutinho-Abreu, Iliano V., da Costa-Latgé, Samara G., Darby, Alistair, Dillon, Viv M., Emrich, Scott J., Fernandez-Medina, Daniela, Figueiredo Gontijo, Nelder, Flanley, Catherine M., Gatherer, Derek, Genta, Fernando A., Gesing, Sandra, Giraldo-Calderón, Gloria I., Gomes, Bruno, Aguiar, Eric Roberto Guimaraes Rocha, Hamilton, James G. C., Hamarsheh, Omar, Hawksworth, Mallory, Hendershot, Jacob M., Hickner, Paul V., Imler, Jean-Luc, Ioannidis, Panagiotis, Jennings, Emily C., Kamhawi, Shaden, Karageorgiou, Charikleia, Kennedy, Ryan C., Krueger, Andreas, Latorre-Estivalis, José M., Ligoxygakis, Petros, Meireles-Filho, Antonio Carlos A., Minx, Patrick, Miranda, Jose Carlos, Montague, Michael J., Nowling, Ronald J., Oliveira, Fabiano, Ortigão-Farias, João, Pavan, Marcio G., Horacio Pereira, Marcos, Nobrega Pitaluga, Andre, Proveti Olmo, Roenick, Ramalho-Ortigao, Marcelo, Ribeiro, José M. C., Rosendale, Andrew J., Sant’Anna, Mauricio R. V., Scherer, Steven E., Secundino, Nágila F. C., Shoue, Douglas A., da Silva Moraes, Caroline, Gesto, João Silveira Moledo, Souza, Nataly Araujo, Syed, Zainulabueddin, Tadros, Samuel, Teles-de-Freitas, Rayane, Telleria, Erich L., Tomlinson, Chad, Traub-Csekö, Yara M., Marques, João Trindade, Tu, Zhijian, Unger, Maria F., Valenzuela, Jesus, Ferreira, Flávia V., de Oliveira, Karla P. V., Vigoder, Felipe M., Vontas, John, Wang, Lihui, Weedall, Gareth D., Zhioua, Elyes, Richards, Stephen, Warren, Wesley C., Waterhouse, Robert M., Dillon, Rod J., McDowell, Mary Ann
Publicado 2023

Genomic insights into the Ixodes scapularis tick vector of Lyme disease

por Gulia-Nuss, Monika, Nuss, Andrew B., Meyer, Jason M., Sonenshine, Daniel E., Roe, R. Michael, Waterhouse, Robert M., Sattelle, David B., de la Fuente, José, Ribeiro, Jose M., Megy, Karine, Thimmapuram, Jyothi, Miller, Jason R., Walenz, Brian P., Koren, Sergey, Hostetler, Jessica B., Thiagarajan, Mathangi, Joardar, Vinita S., Hannick, Linda I., Bidwell, Shelby, Hammond, Martin P., Young, Sarah, Zeng, Qiandong, Abrudan, Jenica L., Almeida, Francisca C., Ayllón, Nieves, Bhide, Ketaki, Bissinger, Brooke W., Bonzon-Kulichenko, Elena, Buckingham, Steven D., Caffrey, Daniel R., Caimano, Melissa J., Croset, Vincent, Driscoll, Timothy, Gilbert, Don, Gillespie, Joseph J., Giraldo-Calderón, Gloria I., Grabowski, Jeffrey M., Jiang, David, Khalil, Sayed M. S., Kim, Donghun, Kocan, Katherine M., Koči, Juraj, Kuhn, Richard J., Kurtti, Timothy J., Lees, Kristin, Lang, Emma G., Kennedy, Ryan C., Kwon, Hyeogsun, Perera, Rushika, Qi, Yumin, Radolf, Justin D., Sakamoto, Joyce M., Sánchez-Gracia, Alejandro, Severo, Maiara S., Silverman, Neal, Šimo, Ladislav, Tojo, Marta, Tornador, Cristian, Van Zee, Janice P., Vázquez, Jesús, Vieira, Filipe G., Villar, Margarita, Wespiser, Adam R., Yang, Yunlong, Zhu, Jiwei, Arensburger, Peter, Pietrantonio, Patricia V., Barker, Stephen C., Shao, Renfu, Zdobnov, Evgeny M., Hauser, Frank, Grimmelikhuijzen, Cornelis J. P., Park, Yoonseong, Rozas, Julio, Benton, Richard, Pedra, Joao H. F., Nelson, David R., Unger, Maria F., Tubio, Jose M. C., Tu, Zhijian, Robertson, Hugh M., Shumway, Martin, Sutton, Granger, Wortman, Jennifer R., Lawson, Daniel, Wikel, Stephen K., Nene, Vishvanath M., Fraser, Claire M., Collins, Frank H., Birren, Bruce, Nelson, Karen E., Caler, Elisabet, Hill, Catherine A.
Publicado 2016