Enhanced Sampling of the SARS-CoV-2 s2m Element

por Kensinger, Adam H., Pellegrene, Kendy A., Imperatore, Joshua, Srnec, Matthew N., Mihailescu, Mihaela-Rita, Evanseck, Jeffrey D.
Publicado 2021

Viral-host RNA-RNA interactions in SARS-CoV-2: Study of miR-34a-5p binding interactions within the genome 3'-untranslated region

por Frye, Caleb J., Cunningham, Caylee, Kensinger, Adam H., Makowski, Joseph A., Evanseck, Jeffrey D., Mihailescu, Mihaela-Rita
Publicado 2023

Uridylation of the histone mRNA stem-loop weakens binding interactions with SLBP while maintaining interactions with 3’hExo

por Shine, Morgan, Harris, Sarah E., Pellegrene, Kendy A., Kensinger, Adam H., Mihailescu, Mihaela Rita, Evanseck, Jeffrey D., Lackey, Patrick E.
Publicado 2023

Viral-host RNA-RNA interactions in SARS-CoV-2: study of MIR-760-3p interactions with the genome 3'-untranslated region

por Frye, Caleb J., Cunningham, Caylee L., Pellegrene, Kendy A., Kensinger, Adam H., Makowski, Joseph A., Evanseck, Jeffrey D., Mihailescu, Mihaela-Rita
Publicado 2022

Structural and dynamical impact of the two-nucleotide difference in sequence between SARS-CoV and SARS-CoV-2 s2m using molecular dynamics

por Kensinger, Adam H., Pellegrene, Kendy A., Makowski, Joseph A., Cunningham, Caylee L., Frye, Caleb J., Mihailescu, Mihaela-Rita, Evanseck, Jeffrey D.
Publicado 2022

Delta SARS-CoV-2 s2m Structure, Dynamics, and Entropy: Consequences of the G15U Mutation

por Makowski, Joseph A., Kensinger, Adam H., Cunningham, Caylee L., Frye, Caleb J., Shine, Morgan, Lackey, Patrick E., Mihailescu, Mihaela Rita, Evanseck, Jeffrey D.
Publicado 2023

Condensed Liquid Phase 3D Structure of SARS-CoV-2 s2m Guided by NMR Spectroscopy

por Pellegrene, Kendy A., Imperatore, Joshua A., Cunningham, Caylee L., Kensinger, Adam H., Mihailescu, Petru, Srnec, Matthew N., Mihailescu, Mihaela-Rita, Evanseck, Jeffrey D.
Publicado 2021

Delta variant versus ancestral SARS-CoV-2 s2m dynamics and relative entropy

por Makowski, Joseph A., Kensinger, Adam H., Pellegrene, Kendy A., Cunningham, Caylee, Frye, Caleb J., Lackey, Patrick E., Mihailescu, Mihaela-Rita, Evanseck, Jeffrey D.
Publicado 2023

Structural and thermodynamic consequences of the G31U and U5C mutations in the SARS-CoV-2 s2m

por Kensinger, Adam H., Makowski, Joseph A., Pellegrene, Kendy A., Cunningham, Caylee L., Frye, Caleb J., Lackey, Patrick E., Mihailescu, Mihaela-Rita, Evanseck, Jeffrey D.
Publicado 2023

Stem-loop II motif (s2m) structural and dynamical differences between SARS-CoV-2 and b.1.617.2 (Delta) variant

por Makowski, Joseph A., Kensinger, Adam H., Pellegrene, Kendy A., Cunningham, Caylee, Frye, Caleb J., Shine, Morgan, Bojanac, Izayah, Lackey, Patrick, Mihailescu, Mihaela-Rita, Evanseck, Jeffrey D.
Publicado 2022

Structural, Dynamical, and Entropic Differences between SARS-CoV and SARS-CoV-2 s2m Elements Using Molecular Dynamics Simulations

por Kensinger, Adam H., Makowski, Joseph A., Pellegrene, Kendy A., Imperatore, Joshua A., Cunningham, Caylee L., Frye, Caleb J., Lackey, Patrick E., Mihailescu, Mihaela Rita, Evanseck, Jeffrey D.
Publicado 2022

Characterization of the S2M G15U mutation associated with the SARS-CoV-2 delta variant

por Cunningham, Caylee L., Frye, Caleb J., Imperatore, Joshua A., Pellegrene, Kendy A., Kensinger, Adam H., Makowski, Joseph A., Shine, Morgan, Lackey, Patrick, Evanseck, Jeffrey D., Mihailescu, Mihaela-Rita
Publicado 2022