Probing the “Dark Matter” of the Human Gut Phageome: Culture Assisted Metagenomics Enables Rapid Discovery and Host-Linking for Novel Bacteriophages

por Fitzgerald, C. Brian, Shkoporov, Andrey N., Upadrasta, Aditya, Khokhlova, Ekaterina V., Ross, R. Paul, Hill, Colin
Publicado 2021

ΦCrAss001 represents the most abundant bacteriophage family in the human gut and infects Bacteroides intestinalis

por Shkoporov, Andrey N., Khokhlova, Ekaterina V., Fitzgerald, C. Brian, Stockdale, Stephen R., Draper, Lorraine A., Ross, R. Paul, Hill, Colin
Publicado 2018

Long-term persistence of crAss-like phage crAss001 is associated with phase variation in Bacteroides intestinalis

por Shkoporov, Andrey N., Khokhlova, Ekaterina V., Stephens, Niamh, Hueston, Cara, Seymour, Samuel, Hryckowian, Andrew J., Scholz, Dimitri, Ross, R. Paul, Hill, Colin
Publicado 2021

Temperate bacteriophages infecting the mucin-degrading bacterium Ruminococcus gnavus from the human gut

por Buttimer, Colin, Khokhlova, Ekaterina V., Stein, Lisa, Hueston, Cara M., Govi, Bianca, Draper, Lorraine A., Ross, R. Paul, Shkoporov, Andrey N., Hill, Colin
Publicado 2023

Structural atlas of a human gut crassvirus

por Bayfield, Oliver W., Shkoporov, Andrey N., Yutin, Natalya, Khokhlova, Ekaterina V., Smith, Jake L. R., Hawkins, Dorothy E. D. P., Koonin, Eugene V., Hill, Colin, Antson, Alfred A.
Publicado 2023

Isolation and characterisation of ΦcrAss002, a crAss-like phage from the human gut that infects Bacteroides xylanisolvens

por Guerin, Emma, Shkoporov, Andrey N., Stockdale, Stephen R., Comas, Joan Colom, Khokhlova, Ekaterina V., Clooney, Adam G., Daly, Karen M., Draper, Lorraine A., Stephens, Niamh, Scholz, Dimitri, Ross, R. Paul, Hill, Colin
Publicado 2021

Viral biogeography of the mammalian gut and parenchymal organs

por Shkoporov, Andrey N., Stockdale, Stephen R., Lavelle, Aonghus, Kondova, Ivanela, Heuston, Cara, Upadrasta, Aditya, Khokhlova, Ekaterina V., van der Kamp, Imme, Ouwerling, Boudewijn, Draper, Lorraine A., Langermans, Jan A.M., Ross, R Paul, Hill, Colin
Publicado 2022

Interpersonal variability of the human gut virome confounds disease signal detection in IBD

por Stockdale, Stephen R., Shkoporov, Andrey N., Khokhlova, Ekaterina V., Daly, Karen M., McDonnell, Siobhan A., O’ Regan, Orla, Nolan, James A., Sutton, Thomas D. S., Clooney, Adam G., Ryan, Feargal J., Sheehan, Donal, Lavelle, Aonghus, Draper, Lorraine A., Shanahan, Fergus, Ross, R. Paul, Hill, Colin
Publicado 2023