Biases in read coverage demonstrated by interlaboratory and interplatform comparison of 117 mRNA and genome sequencing experiments

por Khrameeva, Ekaterina E, Gelfand, Mikhail S
Publicado 2012

Spatial Proximity and Similarity of the Epigenetic State of Genome Domains

por Khrameeva, Ekaterina E., Mironov, Andrey A., Fedonin, Gennady G., Khaitovich, Philipp, Gelfand, Mikhail S.
Publicado 2012

Inter-Chromosomal Contact Networks Provide Insights into Mammalian Chromatin Organization

por Kaufmann, Stefanie, Fuchs, Christiane, Gonik, Mariya, Khrameeva, Ekaterina E., Mironov, Andrey A., Frishman, Dmitrij
Publicado 2015

A machine learning framework for the prediction of chromatin folding in Drosophila using epigenetic features

por Rozenwald, Michal B., Galitsyna, Aleksandra A., Sapunov, Grigory V., Khrameeva, Ekaterina E., Gelfand, Mikhail S.
Publicado 2020

Cumulative contact frequency of a chromatin region is an intrinsic property linked to its function

por Samborskaia, Margarita D., Galitsyna, Aleksandra, Pletenev, Ilya, Trofimova, Anna, Mironov, Andrey A., Gelfand, Mikhail S., Khrameeva, Ekaterina E.
Publicado 2020

HiConfidence: a novel approach uncovering the biological signal in Hi-C data affected by technical biases

por Kobets, Victoria A, Ulianov, Sergey V, Galitsyna, Aleksandra A, Doronin, Semen A, Mikhaleva, Elena A, Gelfand, Mikhail S, Shevelyov, Yuri Y, Razin, Sergey V, Khrameeva, Ekaterina E
Publicado 2023

Neanderthal ancestry drives evolution of lipid catabolism in contemporary Europeans

por Khrameeva, Ekaterina E., Bozek, Katarzyna, He, Liu, Yan, Zheng, Jiang, Xi, Wei, Yuning, Tang, Kun, Gelfand, Mikhail S., Prufer, Kay, Kelso, Janet, Paabo, Svante, Giavalisco, Patrick, Lachmann, Michael, Khaitovich, Philipp
Publicado 2014

Activation of the alpha-globin gene expression correlates with dramatic upregulation of nearby non-globin genes and changes in local and large-scale chromatin spatial structure

por Ulianov, Sergey V., Galitsyna, Aleksandra A., Flyamer, Ilya M., Golov, Arkadiy K., Khrameeva, Ekaterina E., Imakaev, Maxim V., Abdennur, Nezar A., Gelfand, Mikhail S., Gavrilov, Alexey A., Razin, Sergey V.
Publicado 2017

Active chromatin and transcription play a key role in chromosome partitioning into topologically associating domains

por Ulianov, Sergey V., Khrameeva, Ekaterina E., Gavrilov, Alexey A., Flyamer, Ilya M., Kos, Pavel, Mikhaleva, Elena A., Penin, Aleksey A., Logacheva, Maria D., Imakaev, Maxim V., Chertovich, Alexander, Gelfand, Mikhail S., Shevelyov, Yuri Y., Razin, Sergey V.
Publicado 2016

Genomic study of the Ket: a Paleo-Eskimo-related ethnic group with significant ancient North Eurasian ancestry

por Flegontov, Pavel, Changmai, Piya, Zidkova, Anastassiya, Logacheva, Maria D., Altınışık, N. Ezgi, Flegontova, Olga, Gelfand, Mikhail S., Gerasimov, Evgeny S., Khrameeva, Ekaterina E., Konovalova, Olga P., Neretina, Tatiana, Nikolsky, Yuri V., Starostin, George, Stepanova, Vita V., Travinsky, Igor V., Tříska, Martin, Tříska, Petr, Tatarinova, Tatiana V.
Publicado 2016

Lipidome determinants of maximal lifespan in mammals

por Bozek, Katarzyna, Khrameeva, Ekaterina E., Reznick, Jane, Omerbašić, Damir, Bennett, Nigel C., Lewin, Gary R., Azpurua, Jorge, Gorbunova, Vera, Seluanov, Andrei, Regnard, Pierrick, Wanert, Fanelie, Marchal, Julia, Pifferi, Fabien, Aujard, Fabienne, Liu, Zhen, Shi, Peng, Pääbo, Svante, Schroeder, Florian, Willmitzer, Lothar, Giavalisco, Patrick, Khaitovich, Philipp
Publicado 2017

Publisher Correction: Lipidome determinants of maximal lifespan in mammals

por Bozek, Katarzyna, Khrameeva, Ekaterina E., Reznick, Jane, Omerbašić, Damir, Bennett, Nigel C., Lewin, Gary R., Azpurua, Jorge, Gorbunova, Vera, Seluanov, Andrei, Regnard, Pierrick, Wanert, Fanelie, Marchal, Julia, Pifferi, Fabien, Aujard, Fabienne, Liu, Zhen, Shi, Peng, Pääbo, Svante, Schroeder, Florian, Willmitzer, Lothar, Giavalisco, Patrick, Khaitovich, Philipp
Publicado 2019

Nuclear lamina integrity is required for proper spatial organization of chromatin in Drosophila

por Ulianov, Sergey V., Doronin, Semen A., Khrameeva, Ekaterina E., Kos, Pavel I., Luzhin, Artem V., Starikov, Sergei S., Galitsyna, Aleksandra A., Nenasheva, Valentina V., Ilyin, Artem A., Flyamer, Ilya M., Mikhaleva, Elena A., Logacheva, Mariya D., Gelfand, Mikhail S., Chertovich, Alexander V., Gavrilov, Alexey A., Razin, Sergey V., Shevelyov, Yuri Y.
Publicado 2019

Order and stochasticity in the folding of individual Drosophila genomes

por Ulianov, Sergey V., Zakharova, Vlada V., Galitsyna, Aleksandra A., Kos, Pavel I., Polovnikov, Kirill E., Flyamer, Ilya M., Mikhaleva, Elena A., Khrameeva, Ekaterina E., Germini, Diego, Logacheva, Mariya D., Gavrilov, Alexey A., Gorsky, Alexander S., Nechaev, Sergey K., Gelfand, Mikhail S., Vassetzky, Yegor S., Chertovich, Alexander V., Shevelyov, Yuri Y., Razin, Sergey V.
Publicado 2021

Comparison of genome architecture at two stages of male germline cell differentiation in Drosophila

por Ilyin, Artem A, Kononkova, Anna D, Golova, Anastasia V, Shloma, Viktor V, Olenkina, Oxana M, Nenasheva, Valentina V, Abramov, Yuri A, Kotov, Alexei A, Maksimov, Daniil A, Laktionov, Petr P, Pindyurin, Alexey V, Galitsyna, Aleksandra A, Ulianov, Sergey V, Khrameeva, Ekaterina E, Gelfand, Mikhail S, Belyakin, Stepan N, Razin, Sergey V, Shevelyov, Yuri Y
Publicado 2022

Between Lake Baikal and the Baltic Sea: genomic history of the gateway to Europe

por Triska, Petr, Chekanov, Nikolay, Stepanov, Vadim, Khusnutdinova, Elza K., Kumar, Ganesh Prasad Arun, Akhmetova, Vita, Babalyan, Konstantin, Boulygina, Eugenia, Kharkov, Vladimir, Gubina, Marina, Khidiyatova, Irina, Khitrinskaya, Irina, Khrameeva, Ekaterina E., Khusainova, Rita, Konovalova, Natalia, Litvinov, Sergey, Marusin, Andrey, Mazur, Alexandr M., Puzyrev, Valery, Ivanoshchuk, Dinara, Spiridonova, Maria, Teslyuk, Anton, Tsygankova, Svetlana, Triska, Martin, Trofimova, Natalya, Vajda, Edward, Balanovsky, Oleg, Baranova, Ancha, Skryabin, Konstantin, Tatarinova, Tatiana V., Prokhortchouk, Egor
Publicado 2017