Chaperonin activity modulates codon adaptation

por Han, Sangjo, Kim, Philip M
Publicado 2010

GDockScore: a graph-based protein–protein docking scoring function

por McFee, Matthew, Kim, Philip M
Publicado 2023

Evolution of biological interaction networks: from models to real data

por Sun, Mark GF, Kim, Philip M
Publicado 2011

Motif mediated protein-protein interactions as drug targets

por Corbi-Verge, Carles, Kim, Philip M.
Publicado 2016

Data driven flexible backbone protein design

por Sun, Mark G. F., Kim, Philip M.
Publicado 2017

A computational approach for designing D-proteins with non-canonical amino acid optimised binding affinity

por Garton, Michael, Sayadi, Maryam, Kim, Philip M.
Publicado 2017

HelixGAN a deep-learning methodology for conditional de novo design of α-helix structures

por Xie, Xuezhi, Valiente, Pedro A, Kim, Philip M
Publicado 2023

The role of disorder in interaction networks: a structural analysis

por Kim, Philip M, Sboner, Andrea, Xia, Yu, Gerstein, Mark
Publicado 2008

PepNN: a deep attention model for the identification of peptide binding sites

por Abdin, Osama, Nim, Satra, Wen, Han, Kim, Philip M.
Publicado 2022

Gate-based quantum computing for protein design

por Khatami, Mohammad Hassan, Mendes, Udson C., Wiebe, Nathan, Kim, Philip M.
Publicado 2023

The Importance of Bottlenecks in Protein Networks: Correlation with Gene Essentiality and Expression Dynamics

por Yu, Haiyuan, Kim, Philip M, Sprecher, Emmett, Trifonov, Valery, Gerstein, Mark
Publicado 2007

Multi-level learning: improving the prediction of protein, domain and residue interactions by allowing information flow between levels

por Yip, Kevin Y, Kim, Philip M, McDermott, Drew, Gerstein, Mark
Publicado 2009

Computational analysis of interactomes: Current and future perspectives for bioinformatics approaches to model the host–pathogen interaction space

por Arnold, Roland, Boonen, Kurt, Sun, Mark G.F., Kim, Philip M.
Publicado 2012

Combining Structural Modeling with Ensemble Machine Learning to Accurately Predict Protein Fold Stability and Binding Affinity Effects upon Mutation

por Berliner, Niklas, Teyra, Joan, Çolak, Recep, Garcia Lopez, Sebastian, Kim, Philip M.
Publicado 2014

Network Evolution: Rewiring and Signatures of Conservation in Signaling

por Sun, Mark G. F., Sikora, Martin, Costanzo, Michael, Boone, Charles, Kim, Philip M.
Publicado 2012

PAT: predictor for structured units and its application for the optimization of target molecules for the generation of synthetic antibodies

por Jeon, Jouhyun, Arnold, Roland, Singh, Fateh, Teyra, Joan, Braun, Tatjana, Kim, Philip M.
Publicado 2016

Computational generation of proteins with predetermined three-dimensional shapes using ProteinSolver

por Strokach, Alexey, Becerra, David, Corbi-Verge, Carles, Perez-Riba, Albert, Kim, Philip M.
Publicado 2021

A structural approach reveals how neighbouring C2H2 zinc fingers influence DNA binding specificity

por Garton, Michael, Najafabadi, Hamed S., Schmitges, Frank W., Radovani, Ernest, Hughes, Timothy R., Kim, Philip M.
Publicado 2015

Protein engineering by highly parallel screening of computationally designed variants

por Sun, Mark G. F., Seo, Moon-Hyeong, Nim, Satra, Corbi-Verge, Carles, Kim, Philip M.
Publicado 2016

A PxL motif promotes timely cell cycle substrate dephosphorylation by the Cdc14 phosphatase

por Kataria, Meghna, Mouilleron, Stephane, Seo, Moon-Hyeong, Corbi-Verge, Carles, Kim, Philip M., Uhlmann, Frank
Publicado 2018