Seg2Link: an efficient and versatile solution for semi-automatic cell segmentation in 3D image stacks

por Wen, Chentao, Matsumoto, Mami, Sawada, Masato, Sawamoto, Kazunobu, Kimura, Koutarou D.
Publicado 2023

In actio optophysiological analyses reveal functional diversification of dopaminergic neurons in the nematode C. elegans

por Tanimoto, Yuki, Zheng, Ying Grace, Fei, Xianfeng, Fujie, Yukako, Hashimoto, Koichi, Kimura, Koutarou D.
Publicado 2016

Electric shock causes a fleeing-like persistent behavioral response in the nematode Caenorhabditis elegans

por Tee, Ling Fei, Young, Jared J, Maruyama, Keisuke, Kimura, Sota, Suzuki, Ryoga, Endo, Yuto, Kimura, Koutarou D
Publicado 2023

Cross-species behavior analysis with attention-based domain-adversarial deep neural networks

por Maekawa, Takuya, Higashide, Daiki, Hara, Takahiro, Matsumura, Kentarou, Ide, Kaoru, Miyatake, Takahisa, Kimura, Koutarou D., Takahashi, Susumu
Publicado 2021

3DeeCellTracker, a deep learning-based pipeline for segmenting and tracking cells in 3D time lapse images

por Wen, Chentao, Miura, Takuya, Voleti, Venkatakaushik, Yamaguchi, Kazushi, Tsutsumi, Motosuke, Yamamoto, Kei, Otomo, Kohei, Fujie, Yukako, Teramoto, Takayuki, Ishihara, Takeshi, Aoki, Kazuhiro, Nemoto, Tomomi, Hillman, Elizabeth MC, Kimura, Koutarou D
Publicado 2021

Calcium dynamics regulating the timing of decision-making in C. elegans

por Tanimoto, Yuki, Yamazoe-Umemoto, Akiko, Fujita, Kosuke, Kawazoe, Yuya, Miyanishi, Yosuke, Yamazaki, Shuhei J, Fei, Xianfeng, Busch, Karl Emanuel, Gengyo-Ando, Keiko, Nakai, Junichi, Iino, Yuichi, Iwasaki, Yuishi, Hashimoto, Koichi, Kimura, Koutarou D
Publicado 2017

Real-time volumetric microscopy of in-vivo dynamics and large-scale samples with SCAPE 2.0

por Voleti, Venkatakaushik, Patel, Kripa B., Li, Wenze, Campos, Citlali Perez, Bharadwaj, Srinidhi, Yu, Hang, Ford, Caitlin, Casper, Malte J., Yan, Richard Wenwei, Liang, Wenxuan, Wen, Chentao, Kimura, Koutarou D., Targoff, Kimara L., Hillman, Elizabeth M.C.
Publicado 2019

Deep learning-assisted comparative analysis of animal trajectories with DeepHL

por Maekawa, Takuya, Ohara, Kazuya, Zhang, Yizhe, Fukutomi, Matasaburo, Matsumoto, Sakiko, Matsumura, Kentarou, Shidara, Hisashi, Yamazaki, Shuhei J., Fujisawa, Ryusuke, Ide, Kaoru, Nagaya, Naohisa, Yamazaki, Koji, Koike, Shinsuke, Miyatake, Takahisa, Kimura, Koutarou D., Ogawa, Hiroto, Takahashi, Susumu, Yoda, Ken
Publicado 2020

STEFTR: A Hybrid Versatile Method for State Estimation and Feature Extraction From the Trajectory of Animal Behavior

por Yamazaki, Shuhei J., Ohara, Kazuya, Ito, Kentaro, Kokubun, Nobuo, Kitanishi, Takuma, Takaichi, Daisuke, Yamada, Yasufumi, Ikejiri, Yosuke, Hiramatsu, Fumie, Fujita, Kosuke, Tanimoto, Yuki, Yamazoe-Umemoto, Akiko, Hashimoto, Koichi, Sato, Katsufumi, Yoda, Ken, Takahashi, Akinori, Ishikawa, Yuki, Kamikouchi, Azusa, Hiryu, Shizuko, Maekawa, Takuya, Kimura, Koutarou D.
Publicado 2019