Escher-FBA: a web application for interactive flux balance analysis

por Rowe, Elliot, Palsson, Bernhard O., King, Zachary A.
Publicado 2018

The y-ome defines the 35% of Escherichia coli genes that lack experimental evidence of function

por Ghatak, Sankha, King, Zachary A, Sastry, Anand, Palsson, Bernhard O
Publicado 2019

Escher-Trace: a web application for pathway-based visualization of stable isotope tracing data

por Kumar, Avi, Mitchener, Jack, King, Zachary A., Metallo, Christian M.
Publicado 2020

Profile of intravenous glyburide for the prevention of cerebral edema following large hemispheric infarction: evidence to date

por King, Zachary A, Sheth, Kevin N, Kimberly, W Taylor, Simard, J Marc
Publicado 2018

Identification of growth-coupled production strains considering protein costs and kinetic variability

por Dinh, Hoang V., King, Zachary A., Palsson, Bernhard O., Feist, Adam M.
Publicado 2018

Escher: A Web Application for Building, Sharing, and Embedding Data-Rich Visualizations of Biological Pathways

por King, Zachary A., Dräger, Andreas, Ebrahim, Ali, Sonnenschein, Nikolaus, Lewis, Nathan E., Palsson, Bernhard O.
Publicado 2015

Adult perioperative cardiac arrest: An overview of 684 cases reported to webAIRS

por Bright, Matthew R, Endlich, Yasmin, King, Zachary DJ, White, Leigh D, Concha Blamey, Sandra I, Culwick, Martin D
Publicado 2023

BiGG Models 2020: multi-strain genome-scale models and expansion across the phylogenetic tree

por Norsigian, Charles J, Pusarla, Neha, McConn, John Luke, Yurkovich, James T, Dräger, Andreas, Palsson, Bernhard O, King, Zachary
Publicado 2020

BiGG Models: A platform for integrating, standardizing and sharing genome-scale models

por King, Zachary A., Lu, Justin, Dräger, Andreas, Miller, Philip, Federowicz, Stephen, Lerman, Joshua A., Ebrahim, Ali, Palsson, Bernhard O., Lewis, Nathan E.
Publicado 2016

COBRAme: A computational framework for genome-scale models of metabolism and gene expression

por Lloyd, Colton J., Ebrahim, Ali, Yang, Laurence, King, Zachary A., Catoiu, Edward, O’Brien, Edward J., Liu, Joanne K., Palsson, Bernhard O.
Publicado 2018

Causal mutations from adaptive laboratory evolution are outlined by multiple scales of genome annotations and condition-specificity

por Phaneuf, Patrick V., Yurkovich, James T., Heckmann, David, Wu, Muyao, Sandberg, Troy E., King, Zachary A., Tan, Justin, Palsson, Bernhard O., Feist, Adam M.
Publicado 2020

The Escherichia coli transcriptome mostly consists of independently regulated modules

por Sastry, Anand V., Gao, Ye, Szubin, Richard, Hefner, Ying, Xu, Sibei, Kim, Donghyuk, Choudhary, Kumari Sonal, Yang, Laurence, King, Zachary A., Palsson, Bernhard O.
Publicado 2019

Updated Review of the Evidence Supporting the Medical and Legal Use of NeuroQuant(®) and NeuroGage(®) in Patients With Traumatic Brain Injury

por Ross, David E., Seabaugh, John, Seabaugh, Jan M., Barcelona, Justis, Seabaugh, Daniel, Wright, Katherine, Norwind, Lee, King, Zachary, Graham, Travis J., Baker, Joseph, Lewis, Tanner
Publicado 2022

Visualizing metabolic network dynamics through time-series metabolomic data

por Buchweitz, Lea F., Yurkovich, James T., Blessing, Christoph, Kohler, Veronika, Schwarzkopf, Fabian, King, Zachary A., Yang, Laurence, Jóhannsson, Freyr, Sigurjónsson, Ólafur E., Rolfsson, Óttar, Heinrich, Julian, Dräger, Andreas
Publicado 2020

The Bitome: digitized genomic features reveal fundamental genome organization

por Lamoureux, Cameron R, Choudhary, Kumari Sonal, King, Zachary A, Sandberg, Troy E, Gao, Ye, Sastry, Anand V, Phaneuf, Patrick V, Choe, Donghui, Cho, Byung-Kwan, Palsson, Bernhard O
Publicado 2020

Laboratory evolution reveals a two-dimensional rate-yield tradeoff in microbial metabolism

por Cheng, Chuankai, O’Brien, Edward J., McCloskey, Douglas, Utrilla, Jose, Olson, Connor, LaCroix, Ryan A., Sandberg, Troy E., Feist, Adam M., Palsson, Bernhard O., King, Zachary A.
Publicado 2019

Embryogenic cell suspensions for high-capacity genetic transformation and regeneration of switchgrass (Panicum virgatum L.)

por Ondzighi-Assoume, Christine A., Willis, Jonathan D., Ouma, Wilson K., Allen, Sara M., King, Zachary, Parrott, Wayne A., Liu, Wusheng, Burris, Jason N., Lenaghan, Scott C., Stewart, C. Neal
Publicado 2019

BOFdat: Generating biomass objective functions for genome-scale metabolic models from experimental data

por Lachance, Jean-Christophe, Lloyd, Colton J., Monk, Jonathan M., Yang, Laurence, Sastry, Anand V., Seif, Yara, Palsson, Bernhard O., Rodrigue, Sébastien, Feist, Adam M., King, Zachary A., Jacques, Pierre-Étienne
Publicado 2019

Genome‐scale metabolic modeling reveals key features of a minimal gene set

por Lachance, Jean‐Christophe, Matteau, Dominick, Brodeur, Joëlle, Lloyd, Colton J, Mih, Nathan, King, Zachary A, Knight, Thomas F, Feist, Adam M, Monk, Jonathan M, Palsson, Bernhard O, Jacques, Pierre‐Étienne, Rodrigue, Sébastien
Publicado 2021

ImmCellFie: A user-friendly web-based platform to infer metabolic function from omics data

por Masson, Helen O., Borland, David, Reilly, Jason, Telleria, Adrian, Shrivastava, Shalki, Watson, Matt, Bustillos, Luthfi, Li, Zerong, Capps, Laura, Kellman, Benjamin P., King, Zachary A., Richelle, Anne, Lewis, Nathan E., Robasky, Kimberly
Publicado 2023