Cultivation and genomic characterization of novel and ubiquitous marine nitrite-oxidizing bacteria from the Nitrospirales

por Mueller, Anna J., Daebeler, Anne, Herbold, Craig W., Kirkegaard, Rasmus H., Daims, Holger
Publicado 2023

Back to Basics – The Influence of DNA Extraction and Primer Choice on Phylogenetic Analysis of Activated Sludge Communities

por Albertsen, Mads, Karst, Søren M., Ziegler, Anja S., Kirkegaard, Rasmus H., Nielsen, Per H.
Publicado 2015

The Signal and the Noise: Characteristics of Antisense RNA in Complex Microbial Communities

por Michaelsen, Thomas Yssing, Brandt, Jakob, Singleton, Caitlin Margaret, Kirkegaard, Rasmus Hansen, Wiesinger, Johanna, Segata, Nicola, Albertsen, Mads
Publicado 2020

Culture-Independent Analyses Reveal Novel Anaerolineaceae as Abundant Primary Fermenters in Anaerobic Digesters Treating Waste Activated Sludge

por McIlroy, Simon J., Kirkegaard, Rasmus H., Dueholm, Morten S., Fernando, Eustace, Karst, Søren M., Albertsen, Mads, Nielsen, Per H.
Publicado 2017

Genomic and kinetic analysis of novel Nitrospinae enriched by cell sorting

por Mueller, Anna J., Jung, Man-Young, Strachan, Cameron R., Herbold, Craig W., Kirkegaard, Rasmus H., Wagner, Michael, Daims, Holger
Publicado 2020

Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing

por Sereika, Mantas, Kirkegaard, Rasmus Hansen, Karst, Søren Michael, Michaelsen, Thomas Yssing, Sørensen, Emil Aarre, Wollenberg, Rasmus Dam, Albertsen, Mads
Publicado 2022

Genomic insights into members of the candidate phylum Hyd24-12 common in mesophilic anaerobic digesters

por Kirkegaard, Rasmus Hansen, Dueholm, Morten Simonsen, McIlroy, Simon Jon, Nierychlo, Marta, Karst, Søren Michael, Albertsen, Mads, Nielsen, Per Halkjær
Publicado 2016

Novel syntrophic bacteria in full-scale anaerobic digesters revealed by genome-centric metatranscriptomics

por Hao, Liping, Michaelsen, Thomas Yssing, Singleton, Caitlin Margaret, Dottorini, Giulia, Kirkegaard, Rasmus Hansen, Albertsen, Mads, Nielsen, Per Halkjær, Dueholm, Morten Simonsen
Publicado 2020

The impact of immigration on microbial community composition in full-scale anaerobic digesters

por Kirkegaard, Rasmus H., McIlroy, Simon J., Kristensen, Jannie M., Nierychlo, Marta, Karst, Søren M., Dueholm, Morten S., Albertsen, Mads, Nielsen, Per H.
Publicado 2017

Secondary Metabolite Production Potential in a Microbiome of the Freshwater Sponge Spongilla lacustris

por Graffius, Sophie, Garzón, Jaime Felipe Guerrero, Zehl, Martin, Pjevac, Petra, Kirkegaard, Rasmus, Flieder, Mathias, Loy, Alexander, Rattei, Thomas, Ostrovsky, Andrew, Zotchev, Sergey B.
Publicado 2023

MiDAS 2.0: an ecosystem-specific taxonomy and online database for the organisms of wastewater treatment systems expanded for anaerobic digester groups

por McIlroy, Simon Jon, Kirkegaard, Rasmus Hansen, McIlroy, Bianca, Nierychlo, Marta, Kristensen, Jannie Munk, Karst, Søren Michael, Albertsen, Mads, Nielsen, Per Halkjær
Publicado 2017

Cultivation and Genomic Analysis of “Candidatus Nitrosocaldus islandicus,” an Obligately Thermophilic, Ammonia-Oxidizing Thaumarchaeon from a Hot Spring Biofilm in Graendalur Valle...

por Daebeler, Anne, Herbold, Craig W., Vierheilig, Julia, Sedlacek, Christopher J., Pjevac, Petra, Albertsen, Mads, Kirkegaard, Rasmus H., de la Torre, José R., Daims, Holger, Wagner, Michael
Publicado 2018

Novel prosthecate bacteria from the candidate phylum Acetothermia

por Hao, Liping, McIlroy, Simon Jon, Kirkegaard, Rasmus Hansen, Karst, Søren Michael, Fernando, Warnakulasuriya Eustace Yrosh, Aslan, Hüsnü, Meyer, Rikke Louise, Albertsen, Mads, Nielsen, Per Halkjær, Dueholm, Morten Simonsen
Publicado 2018

Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing

por Singleton, Caitlin M., Petriglieri, Francesca, Kristensen, Jannie M., Kirkegaard, Rasmus H., Michaelsen, Thomas Y., Andersen, Martin H., Kondrotaite, Zivile, Karst, Søren M., Dueholm, Morten S., Nielsen, Per H., Albertsen, Mads
Publicado 2021

Integrative microbial community analysis reveals full-scale enhanced biological phosphorus removal under tropical conditions

por Law, Yingyu, Kirkegaard, Rasmus Hansen, Cokro, Angel Anisa, Liu, Xianghui, Arumugam, Krithika, Xie, Chao, Stokholm-Bjerregaard, Mikkel, Drautz-Moses, Daniela I., Nielsen, Per Halkjær, Wuertz, Stefan, Williams, Rohan B. H.
Publicado 2016

Complete nitrification by Nitrospira bacteria

por Daims, Holger, Lebedeva, Elena V., Pjevac, Petra, Han, Ping, Herbold, Craig, Albertsen, Mads, Jehmlich, Nico, Palatinszky, Marton, Vierheilig, Julia, Bulaev, Alexandr, Kirkegaard, Rasmus H., von Bergen, Martin, Rattei, Thomas, Bendinger, Bernd, Nielsen, Per H., Wagner, Michael
Publicado 2015

Characterization of the First “Candidatus Nitrotoga” Isolate Reveals Metabolic Versatility and Separate Evolution of Widespread Nitrite-Oxidizing Bacteria

por Kitzinger, Katharina, Koch, Hanna, Lücker, Sebastian, Sedlacek, Christopher J., Herbold, Craig, Schwarz, Jasmin, Daebeler, Anne, Mueller, Anna J., Lukumbuzya, Michael, Romano, Stefano, Leisch, Nikolaus, Karst, Søren Michael, Kirkegaard, Rasmus, Albertsen, Mads, Nielsen, Per Halkjær, Wagner, Michael, Daims, Holger
Publicado 2018

Genomic and in Situ Analyses Reveal the Micropruina spp. as Abundant Fermentative Glycogen Accumulating Organisms in Enhanced Biological Phosphorus Removal Systems

por McIlroy, Simon J., Onetto, Cristobal A., McIlroy, Bianca, Herbst, Florian-Alexander, Dueholm, Morten S., Kirkegaard, Rasmus H., Fernando, Eustace, Karst, Søren M., Nierychlo, Marta, Kristensen, Jannie M., Eales, Kathryn L., Grbin, Paul R., Wimmer, Reinhard, Nielsen, Per Halkjær
Publicado 2018

Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020

por Alm, Erik, Broberg, Eeva K, Connor, Thomas, Hodcroft, Emma B, Komissarov, Andrey B, Maurer-Stroh, Sebastian, Melidou, Angeliki, Neher, Richard A, O’Toole, Áine, Pereyaslov, Dmitriy, Beerenwinkel, Niko, Posada-Céspedes, Susana, Jablonski, Kim Philipp, Ferreira, Pedro Falé, Topolsky, Ivan, Avšič-Županc, Tatjana, Korva, Miša, Poljak, Mario, Zakotnik, Samo, Zorec, Tomaž Mark, Bragstad, Karoline, Hungnes, Olav, Stene-Johansen, Kathrine, Reusken, Chantal, Meijer, Adam, Vennema, Harry, Ruiz-Roldán, Lidia, Bracho, María Alma, García-González, Neris, Chiner-Oms, Álvaro, Cancino-Muñoz, Irving, Comas, Iñaki, Goig, Galo A, Torres-Puente, Manuela, López, Mariana G, Martínez-Priego, Llúcia, D'Auria, Giuseppe, Ferrús-Abad, Loreto, de Marco, Griselda, Galan-Vendrell, Inmaculada, Carbó-Ramirez, Sandra, Ruíz-Hueso, Paula, Coscollá, Mireia, Polackova, Katerina, Kramna, Lenka, Cinek, Ondrej, Richter, Jan, Krashias, George, Tryfonos, Christina, Bashiardes, Stavros, Koptides, Dana, Christodoulou, Christina, Bartolini, Barbara, Gruber, Cesare Em, Di Caro, Antonino, Castilletti, Concetta, Stefani, Fabrizio, Rimoldi, Sara Giordana, Romeri, Francesca, Salerno, Franco, Polesello, Stefano, Nagy, Alexander, Jirincova, Helena, Vecerova, Jaromira, Novakova, Ludmila, Cordey, Samuel, Murtskhvaladze, Marine, Kotaria, Nato, Schär, Tobias, Beisel, Christian, Vugrek, Oliver, Rokić, Filip, Trgovec-Greif, Lovro, Jurak, Igor, Rukavina, Tomislav, Sučić, Neven, Schønning, Kristian, Karst, Søren M, Kirkegaard, Rasmus H, Michaelsen, Thomas Y, Sørensen, Emil Aa, Knutson, Simon, Brandt, Jakob, Le-Quy, Vang, Sørensen, Trine, Petersen, Celine, Pedersen, Martin Schou, Larsen, Sanne Løkkegaard, Skov, Marianne Nielsine, Rasmussen, Morten, Fonager, Jannik, Fomsgaard, Anders, Maksyutov, Rinat Amirovich, Gavrilova, Elena Vasil'Evna, Pyankov, Oleg Victorovich, Bodnev, Sergey Alexandrovich, Tregubchak, Tatyana Vladimirovna, Shvalov, Alexander Nikolayevich, Antonets, Denis Victorovich, Resende, Paola Cristina, Goya, Stephanie, Perrin, Amandine, Lee, Raphael Tc, Yadahalli, Shilpa, Han, Alvin X, Russell, Colin A, Schmutz, Stefan, Zaheri, Maryam, Kufner, Verena, Huber, Michael, Trkola, Alexandra, Antwerpen, Markus, Walter, Mathias C, van der Werf, Sylvie, Gambaro, Fabiana, Behillil, Sylvie, Enouf, Vincent, Donati, Flora, Ustinova, Monta, Rovite, Vita, Klovins, Janis, Savicka, Oksana, Wienecke-Baldacchino, Anke K, Ragimbeau, Catherine, Fournier, Guillaume, Mossong, Joël, Aberle, Stephan W, Haukland, Mattias, Enkirch, Theresa, Advani, Abdolreza, Karlberg, Maria Lind, Lindsjö, Oskar Karlsson, Broddesson, Sandra, Sláviková, Monika, Ličková, Martina, Klempa, Boris, Staroňová, Edita, Tichá, Elena, Szemes, Tomáš, Rusňáková, Diana, Stadler, Tanja, Quer, Josep, Anton, Andres, Andres, Cristina, Piñana, Maria, Garcia-Cehic, Damir, Pumarola, Tomas, Izopet, Jacques, Gioula, Georgia, Exindari, Maria, Papa, Anna, Chatzidimitriou, Dimitrios, Metallidis, Symeon, Pappa, Stella, Macek Jr, Milan, Geryk, Jan, Brož, Petr, Briksí, Aleš, Hubáček, Petr, Dřevínek, Pavel, Zajac, Miroslav, Kvapil, Petr, Holub, Michal, Kvapilová, Kateřina, Novotný, Adam, Kašný, Martin, Klempt, Petr, Vapalahti, Olli, Smura, Teemu, Sironen, Tarja, Selhorst, Philippe, Anthony, Colin, Ariën, Kevin, Simon-Loriere, Etienne, Rabalski, Lukasz, Bienkowska-Szewczyk, Krystyna, Borges, Vítor, Isidro, Joana, Gomes, João Paulo, Guiomar, Raquel, Pechirra, Pedro, Costa, Inês, Duarte, Sílvia, Vieira, Luís, Pyrc, Krzysztof, Zuckerman, Neta S, Turdikulova, Shahlo, Abdullaev, Alisher, Dalimova, Dilbar, Abdurakhimov, Abror, Tagliabracci, Adriano, Alessandrini, Federica, Melchionda, Filomena, Onofri, Valerio, Turchi, Chiara, Bagnarelli, Patrizia, Menzo, Stefano, Caucci, Sara, Di Sante, Laura, Popa, Alexandra, Genger, Jakob-Wendelin, Agerer, Benedikt, Lercher, Alexander, Endler, Lukas, Smyth, Mark, Penz, Thomas, Schuster, Michael, Senekowitsch, Martin, Laine, Jan, Bock, Christoph, Bergthaler, Andreas, Shevtsov, Alexandr, Kalendar, Ruslan, Ramanculov, Yerlan, Graf, Alexander, Muenchhoff, Maximilian, Keppler, Oliver T, Krebs, Stefan, Blum, Helmut, Marcello, Alessandro, Licastro, Danilo, D'Agaro, Pierlanfranco, Laubscher, Florian, Vidanovic, Dejan, Tesovic, Bojana, Volkening, Jeremy, Clementi, Nicola, Mancini, Nicasio, Rupnik, Maja, Mahnic, Aleksander, Walker, Andreas, Houwaart, Torsten, Wienemann, Tobias, Vasconcelos, Malte Kohns, Strelow, Daniel, Jensen, Björn-Erik Ole, Senff, Tina, Hülse, Lisanna, Adams, Ortwin, Andree, Marcel, Hauka, Sandra, Feldt, Torsten, Keitel, Verena, Kindgen-Milles, Detlef, Timm, Jörg, Pfeffer, Klaus, Dilthey, Alexander T, Moore, Catherine, Ozdarendeli, Aykut, Pavel, Shaikh Terkis Islam, Yetiskin, Hazel, Aydin, Gunsu, Holyavkin, Can, Uygut, Muhammet Ali, Cevik, Ceren, Shchetinin, Alexey, Gushchin, Vladimir, Dinler-Doganay, Gizem, Doganay, Levent, Kizilboga-Akgun, Tugba, Karacan, Ilker, Pancer, Katarzyna, Maes, Piet, Martí-Carreras, Joan, Wawina-Bokalanga, Tony, Vanmechelen, Bert, Thürmer, Andrea, Wedde, Marianne, Dürrwald, Ralf, Von Kleist, Max, Drechsel, Oliver, Wolff, Thorsten, Fuchs, Stephan, Kmiecinski, Rene, Michel, Janine, Nitsche, Andreas, Casas, Inmaculada, Caballero, María Iglesias, Zaballos, Ángel, Jiménez, Pilar, Jiménez, Mercedes, Fernández, Sara Monzón, Fernández, Sarai Varona, De La Plaza, Isabel Cuesta, Fadeev, Artem, Ivanova, Anna, Sergeeva, Mariia, Stefanelli, Paola, Torok, M Estee, Hall, Grant, da Silva Filipe, Ana, Turtle, Lance, Afifi, Safiah, Mccluggage, Kathryn, Beer, Robert, Ledesma, Juan, Maksimovic, Joshua, Spellman, Karla, Hamilton, William L, Marchbank, Angela, Southgate, Joel Alexander, Underwood, Anthony, Taylor, Ben, Yeats, Corin, Abudahab, Khalil, Gemmell, Matthew R, Eccles, Richard, Lucaci, Anita, Nelson, Charlotte Abigail, Rainbow, Lucille, Whitehead, Mark, Gregory, Richard, Haldenby, Sam, Paterson, Steve, Hughes, Margaret A, Curran, Martin D, Baker, David, Tucker, Rachel, Green, Luke R, Feltwell, Theresa, Halstead, Fenella D, Wyles, Matthew, Jahun, Aminu S, Ahmad, Shazaad S Y, Georgana, Iliana, Goodfellow, Ian, Yakovleva, Anna, Meredith, Luke W, Gavriil, Artemis, Awan, Ali Raza, Fisher, Chloe, Edgeworth, Jonathan, Lynch, Jessica, Moore, Nathan, Williams, Rebecca, Kidd, Stephen P, Cortes, Nicholas, Brunker, Kirstyn, Mccrone, John T, Quick, Joshua, Duckworth, Nichola, Walsh, Sarah, Sloan, Tim, Ludden, Catherine, George, Ryan P, Eltringham, Gary, Brown, Julianne R, Aranday-Cortes, Elihu, Shepherd, James G, Hughes, Joseph, Li, Kathy K, Williams, Thomas C, Johnson, Natasha, Jesudason, Natasha, Mair, Daniel, Thomson, Emma, Shah, Rajiv, Parr, Yasmin A, Carmichael, Stephen, Robertson, David L, Nomikou, Kyriaki, Broos, Alice, Niebel, Marc, Smollett, Katherine, Tong, Lily, Miah, Shahjahan, Wittner, Anita, Phillips, Nicole, Payne, Brendan, Dewar, Rebecca, Holmes, Alison, Bolt, Frances, Price, James R, Mookerjee, Siddharth, Sethi, Dheeraj K, Potter, Will, Stanley, Rachael, Prakash, Reenesh, Dervisevic, Samir, Graham, Jonathan Clive, Nelson, Andrew, Smith, Darren, Young, Gregory R, Yew, Wen Chyin, Todd, John A, Trebes, Amy, Andersson, Monique, Bull, Matthew, Watkins, Joanne, Birchley, Alec, Gatica-Wilcox, Bree, Gilbert, Lauren, Kumžiene-Summerhayes, Sara, Rey, Sara, Chauhan, Anoop, Butcher, Ethan, Bicknell, Kelly, Elliott, Scott, Glaysher, Sharon, Lackenby, Angie, Bibby, David, Platt, Steven, Mohamed, Hodan, Machin, Nicholas William, Mbisa, Jean Lutamyo, Evans, Jonathan, Perry, Malorie, Pacchiarini, Nicole, Corden, Sally, Adams, Alexander Geraint, Gaskin, Amy, Coombs, Jason, Graham, Lee John, Cottrell, Simon, Morgan, Mari, Gifford, Laura, Kolyva, Anastasia, Rudder, Steven John, Trotter, Alexander J, Mather, Alison E, Aydin, Alp, Page, Andrew J, Kay, Gemma L, de Oliveira Martins, Leonardo, Yasir, Muhammad, Alikhan, Nabil-Fareed, Thomson, Nicholas M, Gilroy, Rachel, Kingsley, Robert A, O'Grady, Justin, Gutierrez, Ana Victoria, Diaz, Maria, Le Viet, Thanh, Tedim, Ana P, Adriaenssens, Evelien M, Mcclure, C Patrick, Moore, Christopher, Sang, Fei, Clark, Gemma, Howson-Wells, Hannah C, Debebe, Johnny, Ball, Jonathan, Chappell, Joseph, Khakh, Manjinder, Carlile, Matthew, Loose, Matthew, Lister, Michelle M, Holmes, Nadine, Tsoleridis, Theocharis, Fleming, Vicki M, Wright, Victoria, Smith, Wendy, Gallagher, Michael D, Parker, Matthew, Partridge, David G, Evans, Cariad, Baker, Paul, Essex, Sarah, Liggett, Steven, Keeley, Alexander J, Bashton, Matthew, Rooke, Stefan, Dervisevic, Samir, Meader, Emma Jane, Balcazar Lopez, Carlos Enrique, Angyal, Adrienn, Kristiansen, Mark, Tutill, Helena J, Findlay, Jacqueline, Mestek-Boukhibar, Lamia, Forrest, Leysa, Dyal, Patricia, Williams, Rachel J, Panchbhaya, Yasmin, Williams, Charlotte A, Roy, Sunando, Pandey, Sarojini, Stockton, Jo, Loman, Nicholas J, Poplawski, Radoslaw, Nicholls, Samuel, Rowe, W P M, Khokhar, Fahad, Pinckert, Malte Lars, Hosmillo, Myra, Chaudhry, Yasmin, Caller, Laura G, Davidson, Rose K, Griffith, Luke, Rambaut, Andrew, Jackson, Ben, Colquhoun, Rachel, Hill, Verity, Nichols, Jenna, Asamaphan, Patawee, Darby, Alistair, Jackson, Kathryn A, Iturriza-Gomara, Miren, Vamos, Ecaterina Edith, Green, Angie, Aanensen, David, Bonsall, David, Buck, David, Macintyre-Cockett, George, de Cesare, Mariateresa, Pybus, Oliver, Golubchik, Tanya, Scarlett, Garry, Loveson, Katie F, Robson, Samuel C, Beckett, Angela, Lindsey, Benjamin, Groves, Danielle C, Parsons, Paul J, Mchugh, Martin P, Barnes, James Daniel, Manso, Carmen F, Grammatopoulos, Dimitris, Menger, Katja Elisabeth, Harrison, Ewan, Gunson, Rory, Peacock, Sharon J, Gonzalez, Gabriel, Carr, Michael, Mihaela, Lazar, Popovici, Odette, Brytting, Mia, Bresner, Catherine, Fuller, William, Workman, Trudy, Mentis, Andreas F, Kossyvakis, Athanasios, Karamitros, Timokratis, Pogka, Vasiliki, Kalliaropoulos, Antonios, Horefti, Elina, Kontou, Aspasia, Martinez-Gonzalez, Beatriz, Labropoulou, Voula, Voulgari-Kokota, Androniki, Evangelidou, Maria, Bizta, Panagiota, Belimezi, Maria, Lambrechts, Laurens, Doymaz, Mehmet Z, Yazici, Merve Kalkan, Cetin, Nesibe S, Karaaslan, Elif, Kallio-Kokko, Hannimari, Virtanen, Jenni, Suvanto, Maija, Nguyen, Phuoc Truong, Ellonen, Pekka, Hannula, Sari, Kangas, Harri, Sreenu, Vattipally B, Burián, Katalin, Terhes, Gabriella, Gombos, Katalin, Gyenesei, Attila, Urbán, Péter, Herczeg, Róbert, Jakab, Ferenc, Kemenesi, Gábor, Tóth, Gábor Endre, Somogyi, Balázs, Zana, Brigitta, Zeghbib, Safia, Kuczmog, Anett, Földes, Fanni, Lanszki, Zsófia, Madai, Mónika, Papp, Henrietta, Nagy, Ágnes, Pereszlényi, Csaba István, Babinszky, Gergely Csaba, Dudás, Gábor, Csoma, Eszter, Abou Tayoun, Ahmad N, Alsheikh-Ali, Alawi A, Loney, Tom, Nowotny, Norbert, Abdul-Wahab, Osama, Gonzalez-Candelas, Fernando, Andersen, Martin H, Taylor, Sarah
Publicado 2020